Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Sox1P53783 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sox1P53783 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sox1P53783 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sox1P53783 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sox1P53783 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sox1P53783 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
Sox1P53783 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC17.16■□□□□ 0.34
Sox1P53783 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sox1P53783 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC17.16■□□□□ 0.34
Sox1P53783 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC17.16■□□□□ 0.34
Sox1P53783 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC17.16■□□□□ 0.34
Sox1P53783 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Sox1P53783 AC174742.1-201ENSMUST00000218272 304 ntBASIC17.16■□□□□ 0.34
Sox1P53783 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sox1P53783 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Sox1P53783 Hist1h2al-201ENSMUST00000091708 339 ntBASIC17.16■□□□□ 0.34
Sox1P53783 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sox1P53783 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sox1P53783 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sox1P53783 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sox1P53783 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Sox1P53783 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sox1P53783 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Sox1P53783 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sox1P53783 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Sox1P53783 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sox1P53783 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sox1P53783 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Sox1P53783 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Sox1P53783 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC17.15■□□□□ 0.34
Sox1P53783 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC17.15■□□□□ 0.34
Sox1P53783 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC17.15■□□□□ 0.34
Sox1P53783 AC084391.1-201ENSMUST00000200651 141 ntBASIC17.15■□□□□ 0.34
Sox1P53783 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC17.15■□□□□ 0.34
Sox1P53783 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sox1P53783 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Sox1P53783 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Sox1P53783 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Sox1P53783 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sox1P53783 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sox1P53783 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sox1P53783 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.34
Sox1P53783 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.34
Sox1P53783 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Sox1P53783 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sox1P53783 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Sox1P53783 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sox1P53783 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sox1P53783 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sox1P53783 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Sox1P53783 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Sox1P53783 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sox1P53783 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Sox1P53783 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC17.14■□□□□ 0.33
Sox1P53783 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC17.14■□□□□ 0.33
Sox1P53783 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sox1P53783 Mir8117-201ENSMUST00000184773 107 ntBASIC17.14■□□□□ 0.33
Sox1P53783 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC17.14■□□□□ 0.33
Sox1P53783 Gm37584-201ENSMUST00000193595 1290 ntBASIC17.14■□□□□ 0.33
Sox1P53783 Gm43767-201ENSMUST00000198933 381 ntBASIC17.14■□□□□ 0.33
Sox1P53783 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC17.14■□□□□ 0.33
Sox1P53783 AC140375.2-201ENSMUST00000225283 584 ntBASIC17.14■□□□□ 0.33
Sox1P53783 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Sox1P53783 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sox1P53783 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sox1P53783 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Sox1P53783 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sox1P53783 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sox1P53783 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Sox1P53783 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sox1P53783 Gm10616-201ENSMUST00000205285 2127 ntBASIC17.14■□□□□ 0.33
Sox1P53783 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sox1P53783 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC17.13■□□□□ 0.33
Sox1P53783 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Sox1P53783 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sox1P53783 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC17.13■□□□□ 0.33
Sox1P53783 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC17.13■□□□□ 0.33
Sox1P53783 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Sox1P53783 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sox1P53783 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sox1P53783 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sox1P53783 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC17.13■□□□□ 0.33
Sox1P53783 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sox1P53783 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Sox1P53783 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sox1P53783 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sox1P53783 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Sox1P53783 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sox1P53783 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Sox1P53783 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sox1P53783 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sox1P53783 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC17.12■□□□□ 0.33
Sox1P53783 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC17.12■□□□□ 0.33
Sox1P53783 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC17.12■□□□□ 0.33
Sox1P53783 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sox1P53783 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC17.12■□□□□ 0.33
Sox1P53783 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sox1P53783 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sox1P53783 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms