Protein–RNA interactions for Protein: P50405

Sftpb, Pulmonary surfactant-associated protein B, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SftpbP50405 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SftpbP50405 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SftpbP50405 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
SftpbP50405 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC17.24■□□□□ 0.35
SftpbP50405 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SftpbP50405 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
SftpbP50405 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SftpbP50405 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SftpbP50405 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SftpbP50405 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC17.24■□□□□ 0.35
SftpbP50405 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SftpbP50405 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SftpbP50405 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
SftpbP50405 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC17.24■□□□□ 0.35
SftpbP50405 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC17.24■□□□□ 0.35
SftpbP50405 Gm24841-201ENSMUST00000158676 357 ntBASIC17.24■□□□□ 0.35
SftpbP50405 Gm37856-201ENSMUST00000191634 999 ntBASIC17.24■□□□□ 0.35
SftpbP50405 Trmt13-210ENSMUST00000198454 880 ntBASIC17.24■□□□□ 0.35
SftpbP50405 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC17.24■□□□□ 0.35
SftpbP50405 Slc35b2-207ENSMUST00000226086 850 ntBASIC17.24■□□□□ 0.35
SftpbP50405 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SftpbP50405 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SftpbP50405 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SftpbP50405 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SftpbP50405 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SftpbP50405 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
SftpbP50405 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SftpbP50405 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SftpbP50405 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SftpbP50405 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
SftpbP50405 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SftpbP50405 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
SftpbP50405 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SftpbP50405 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SftpbP50405 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SftpbP50405 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SftpbP50405 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
SftpbP50405 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SftpbP50405 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
SftpbP50405 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SftpbP50405 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SftpbP50405 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
SftpbP50405 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SftpbP50405 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SftpbP50405 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
SftpbP50405 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
SftpbP50405 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
SftpbP50405 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
SftpbP50405 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC17.22■□□□□ 0.35
SftpbP50405 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SftpbP50405 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SftpbP50405 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SftpbP50405 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SftpbP50405 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SftpbP50405 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
SftpbP50405 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SftpbP50405 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SftpbP50405 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SftpbP50405 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
SftpbP50405 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SftpbP50405 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
SftpbP50405 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SftpbP50405 Gm37166-201ENSMUST00000195473 2474 ntBASIC17.21■□□□□ 0.35
SftpbP50405 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SftpbP50405 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
SftpbP50405 Gm12527-201ENSMUST00000117967 564 ntBASIC17.21■□□□□ 0.35
SftpbP50405 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SftpbP50405 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC17.21■□□□□ 0.35
SftpbP50405 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC17.21■□□□□ 0.35
SftpbP50405 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
SftpbP50405 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SftpbP50405 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
SftpbP50405 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SftpbP50405 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SftpbP50405 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC17.21■□□□□ 0.35
SftpbP50405 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC17.21■□□□□ 0.35
SftpbP50405 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
SftpbP50405 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
SftpbP50405 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
SftpbP50405 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
SftpbP50405 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
SftpbP50405 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
SftpbP50405 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
SftpbP50405 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SftpbP50405 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SftpbP50405 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SftpbP50405 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC17.2■□□□□ 0.34
SftpbP50405 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SftpbP50405 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
SftpbP50405 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
SftpbP50405 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
SftpbP50405 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC17.2■□□□□ 0.34
SftpbP50405 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SftpbP50405 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SftpbP50405 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SftpbP50405 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
SftpbP50405 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
SftpbP50405 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SftpbP50405 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
SftpbP50405 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms