Protein–RNA interactions for Protein: P48754

Brca1, Breast cancer type 1 susceptibility protein homolog, mousemouse

Predictions only

Length 1,812 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca1P48754 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Brca1P48754 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Brca1P48754 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Brca1P48754 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC18.87■□□□□ 0.61
Brca1P48754 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC18.87■□□□□ 0.61
Brca1P48754 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Brca1P48754 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Brca1P48754 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Brca1P48754 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
Brca1P48754 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Brca1P48754 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Brca1P48754 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Brca1P48754 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Brca1P48754 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC18.87■□□□□ 0.61
Brca1P48754 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Brca1P48754 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Brca1P48754 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Brca1P48754 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Brca1P48754 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Brca1P48754 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Brca1P48754 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Brca1P48754 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC18.86■□□□□ 0.61
Brca1P48754 Gm12497-201ENSMUST00000138778 237 ntBASIC18.86■□□□□ 0.61
Brca1P48754 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Brca1P48754 Gm7507-201ENSMUST00000183053 1008 ntBASIC18.86■□□□□ 0.61
Brca1P48754 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Brca1P48754 AC084391.1-201ENSMUST00000200651 141 ntBASIC18.86■□□□□ 0.61
Brca1P48754 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Brca1P48754 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Brca1P48754 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Brca1P48754 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Brca1P48754 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Brca1P48754 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Brca1P48754 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Brca1P48754 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Brca1P48754 Gm25745-201ENSMUST00000174945 133 ntBASIC18.86■□□□□ 0.61
Brca1P48754 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC18.86■□□□□ 0.61
Brca1P48754 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC18.86■□□□□ 0.61
Brca1P48754 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Brca1P48754 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Brca1P48754 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Brca1P48754 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Brca1P48754 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC18.85■□□□□ 0.61
Brca1P48754 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC18.85■□□□□ 0.61
Brca1P48754 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC18.85■□□□□ 0.61
Brca1P48754 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC18.85■□□□□ 0.61
Brca1P48754 AV026068-213ENSMUST00000223675 1171 ntBASIC18.85■□□□□ 0.61
Brca1P48754 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC18.85■□□□□ 0.61
Brca1P48754 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Brca1P48754 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Brca1P48754 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
Brca1P48754 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Brca1P48754 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Brca1P48754 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Brca1P48754 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Brca1P48754 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC18.84■□□□□ 0.61
Brca1P48754 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC18.84■□□□□ 0.61
Brca1P48754 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Brca1P48754 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Brca1P48754 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Brca1P48754 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC18.84■□□□□ 0.61
Brca1P48754 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Brca1P48754 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Brca1P48754 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Brca1P48754 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Brca1P48754 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Brca1P48754 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Brca1P48754 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC18.84■□□□□ 0.61
Brca1P48754 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Brca1P48754 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Brca1P48754 Gm15590-201ENSMUST00000078419 552 ntBASIC18.84■□□□□ 0.61
Brca1P48754 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Brca1P48754 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Brca1P48754 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Brca1P48754 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Brca1P48754 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Brca1P48754 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC18.83■□□□□ 0.6
Brca1P48754 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC18.83■□□□□ 0.6
Brca1P48754 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Brca1P48754 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC18.83■□□□□ 0.6
Brca1P48754 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Brca1P48754 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Brca1P48754 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Brca1P48754 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Brca1P48754 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Brca1P48754 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Brca1P48754 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
Brca1P48754 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Brca1P48754 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC18.82■□□□□ 0.6
Brca1P48754 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Brca1P48754 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
Brca1P48754 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Brca1P48754 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Brca1P48754 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Brca1P48754 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Brca1P48754 Gm13418-201ENSMUST00000119097 944 ntBASIC18.81■□□□□ 0.6
Brca1P48754 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC18.81■□□□□ 0.6
Brca1P48754 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Brca1P48754 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Brca1P48754 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 62.7 ms