Protein–RNA interactions for Protein: P48379

Rfx2, DNA-binding protein RFX2, mousemouse

Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx2P48379 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC17.63■□□□□ 0.41
Rfx2P48379 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Rfx2P48379 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC17.63■□□□□ 0.41
Rfx2P48379 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Rfx2P48379 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Rfx2P48379 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Rfx2P48379 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rfx2P48379 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rfx2P48379 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rfx2P48379 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC17.63■□□□□ 0.41
Rfx2P48379 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rfx2P48379 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Rfx2P48379 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC17.62■□□□□ 0.41
Rfx2P48379 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Rfx2P48379 Gm43272-201ENSMUST00000200599 1584 ntBASIC17.62■□□□□ 0.41
Rfx2P48379 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rfx2P48379 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
Rfx2P48379 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rfx2P48379 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rfx2P48379 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC17.62■□□□□ 0.41
Rfx2P48379 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Rfx2P48379 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rfx2P48379 Gm10819-201ENSMUST00000099988 561 ntBASIC17.62■□□□□ 0.41
Rfx2P48379 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC17.62■□□□□ 0.41
Rfx2P48379 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rfx2P48379 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rfx2P48379 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rfx2P48379 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rfx2P48379 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rfx2P48379 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rfx2P48379 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rfx2P48379 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Rfx2P48379 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rfx2P48379 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC17.61■□□□□ 0.41
Rfx2P48379 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Rfx2P48379 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
Rfx2P48379 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC17.61■□□□□ 0.41
Rfx2P48379 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC17.61■□□□□ 0.41
Rfx2P48379 Mir8112-201ENSMUST00000184382 131 ntBASIC17.61■□□□□ 0.41
Rfx2P48379 Gm5587-201ENSMUST00000206270 674 ntBASIC17.61■□□□□ 0.41
Rfx2P48379 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rfx2P48379 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Rfx2P48379 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Rfx2P48379 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Rfx2P48379 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rfx2P48379 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rfx2P48379 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rfx2P48379 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
Rfx2P48379 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Rfx2P48379 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC17.61■□□□□ 0.41
Rfx2P48379 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC17.61■□□□□ 0.41
Rfx2P48379 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC17.61■□□□□ 0.41
Rfx2P48379 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
Rfx2P48379 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rfx2P48379 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rfx2P48379 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Rfx2P48379 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Rfx2P48379 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rfx2P48379 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rfx2P48379 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rfx2P48379 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rfx2P48379 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rfx2P48379 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC17.6■□□□□ 0.41
Rfx2P48379 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rfx2P48379 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Rfx2P48379 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rfx2P48379 Gm8258-201ENSMUST00000055593 1449 ntBASIC17.6■□□□□ 0.41
Rfx2P48379 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC17.6■□□□□ 0.41
Rfx2P48379 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Rfx2P48379 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rfx2P48379 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Rfx2P48379 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC17.6■□□□□ 0.41
Rfx2P48379 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rfx2P48379 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rfx2P48379 Gm20628-201ENSMUST00000177363 3215 ntBASIC17.6■□□□□ 0.41
Rfx2P48379 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC17.59■□□□□ 0.41
Rfx2P48379 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rfx2P48379 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rfx2P48379 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Rfx2P48379 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rfx2P48379 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rfx2P48379 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rfx2P48379 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Rfx2P48379 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rfx2P48379 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rfx2P48379 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
Rfx2P48379 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rfx2P48379 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rfx2P48379 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rfx2P48379 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rfx2P48379 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Rfx2P48379 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Rfx2P48379 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Rfx2P48379 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Rfx2P48379 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC17.58■□□□□ 0.41
Rfx2P48379 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.41
Rfx2P48379 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Rfx2P48379 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Rfx2P48379 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rfx2P48379 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms