Protein–RNA interactions for Protein: P47993

Xcl1, Lymphotactin, mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xcl1P47993 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Xcl1P47993 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Xcl1P47993 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Xcl1P47993 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Xcl1P47993 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Xcl1P47993 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Xcl1P47993 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Xcl1P47993 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Xcl1P47993 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Xcl1P47993 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Xcl1P47993 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Xcl1P47993 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Xcl1P47993 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Xcl1P47993 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Xcl1P47993 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Xcl1P47993 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Xcl1P47993 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Xcl1P47993 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Xcl1P47993 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.64
Xcl1P47993 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Xcl1P47993 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Xcl1P47993 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Xcl1P47993 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Xcl1P47993 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Xcl1P47993 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Xcl1P47993 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Xcl1P47993 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Xcl1P47993 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Xcl1P47993 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC11.02□□□□□ -0.65
Xcl1P47993 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Xcl1P47993 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Xcl1P47993 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Xcl1P47993 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Xcl1P47993 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Xcl1P47993 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Xcl1P47993 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Xcl1P47993 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC11.02□□□□□ -0.65
Xcl1P47993 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Xcl1P47993 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Xcl1P47993 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Xcl1P47993 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Xcl1P47993 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Xcl1P47993 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Xcl1P47993 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Xcl1P47993 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Xcl1P47993 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Xcl1P47993 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Xcl1P47993 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Xcl1P47993 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Xcl1P47993 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Xcl1P47993 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Xcl1P47993 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Xcl1P47993 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Xcl1P47993 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Xcl1P47993 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Xcl1P47993 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC11.01□□□□□ -0.65
Xcl1P47993 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Xcl1P47993 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Xcl1P47993 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Xcl1P47993 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC11.01□□□□□ -0.65
Xcl1P47993 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC11.01□□□□□ -0.65
Xcl1P47993 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Xcl1P47993 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Xcl1P47993 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Xcl1P47993 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Xcl1P47993 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Xcl1P47993 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Xcl1P47993 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Xcl1P47993 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Xcl1P47993 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Xcl1P47993 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Xcl1P47993 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Xcl1P47993 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Xcl1P47993 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC11□□□□□ -0.65
Xcl1P47993 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Xcl1P47993 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Xcl1P47993 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC11□□□□□ -0.65
Xcl1P47993 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Xcl1P47993 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Xcl1P47993 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC11□□□□□ -0.65
Xcl1P47993 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Xcl1P47993 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Xcl1P47993 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC11□□□□□ -0.65
Xcl1P47993 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC11□□□□□ -0.65
Xcl1P47993 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC11□□□□□ -0.65
Xcl1P47993 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC11□□□□□ -0.65
Xcl1P47993 Wnt10b-206ENSMUST00000228546 2709 ntBASIC11□□□□□ -0.65
Xcl1P47993 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Xcl1P47993 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Xcl1P47993 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Xcl1P47993 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Xcl1P47993 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Xcl1P47993 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Xcl1P47993 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC11□□□□□ -0.65
Xcl1P47993 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Xcl1P47993 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Xcl1P47993 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Xcl1P47993 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC11□□□□□ -0.65
Xcl1P47993 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Xcl1P47993 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC11□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms