Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Sox6P40645 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Sox6P40645 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Sox6P40645 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Sox6P40645 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Sox6P40645 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Sox6P40645 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Sox6P40645 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC15.81■□□□□ 0.12
Sox6P40645 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Sox6P40645 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sox6P40645 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Sox6P40645 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sox6P40645 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sox6P40645 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sox6P40645 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Sox6P40645 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sox6P40645 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
Sox6P40645 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sox6P40645 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sox6P40645 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Sox6P40645 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Sox6P40645 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sox6P40645 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sox6P40645 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC15.8■□□□□ 0.12
Sox6P40645 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Sox6P40645 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sox6P40645 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Sox6P40645 Gm11643-201ENSMUST00000119578 864 ntBASIC15.8■□□□□ 0.12
Sox6P40645 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Sox6P40645 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Sox6P40645 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC15.8■□□□□ 0.12
Sox6P40645 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC15.8■□□□□ 0.12
Sox6P40645 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sox6P40645 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sox6P40645 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sox6P40645 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Sox6P40645 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sox6P40645 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sox6P40645 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sox6P40645 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Sox6P40645 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sox6P40645 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Sox6P40645 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Sox6P40645 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sox6P40645 AC154231.1-201ENSMUST00000220564 2175 ntBASIC15.79■□□□□ 0.12
Sox6P40645 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Sox6P40645 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Sox6P40645 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC15.79■□□□□ 0.12
Sox6P40645 Gm13216-201ENSMUST00000117145 591 ntBASIC15.79■□□□□ 0.12
Sox6P40645 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Sox6P40645 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Sox6P40645 Gm42545-201ENSMUST00000202755 922 ntBASIC15.79■□□□□ 0.12
Sox6P40645 Gm10812-201ENSMUST00000099864 546 ntBASIC15.79■□□□□ 0.12
Sox6P40645 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sox6P40645 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
Sox6P40645 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Sox6P40645 Gm10654-201ENSMUST00000098653 1633 ntBASIC15.79■□□□□ 0.12
Sox6P40645 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sox6P40645 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sox6P40645 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sox6P40645 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sox6P40645 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC15.78■□□□□ 0.12
Sox6P40645 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sox6P40645 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sox6P40645 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sox6P40645 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sox6P40645 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Sox6P40645 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
Sox6P40645 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Sox6P40645 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Sox6P40645 Gm12382-201ENSMUST00000122005 922 ntBASIC15.78■□□□□ 0.12
Sox6P40645 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC15.78■□□□□ 0.12
Sox6P40645 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sox6P40645 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sox6P40645 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC15.78■□□□□ 0.12
Sox6P40645 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sox6P40645 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sox6P40645 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Sox6P40645 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC15.78■□□□□ 0.12
Sox6P40645 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Sox6P40645 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Sox6P40645 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sox6P40645 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC15.78■□□□□ 0.12
Sox6P40645 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Sox6P40645 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sox6P40645 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sox6P40645 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sox6P40645 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC15.78■□□□□ 0.12
Sox6P40645 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sox6P40645 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sox6P40645 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sox6P40645 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sox6P40645 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
Sox6P40645 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Sox6P40645 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Sox6P40645 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Sox6P40645 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Sox6P40645 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Sox6P40645 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
Sox6P40645 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms