Protein–RNA interactions for Protein: P39876

Timp3, Metalloproteinase inhibitor 3, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Timp3P39876 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC13.77□□□□□ -0.21
Timp3P39876 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Timp3P39876 Gm21362-201ENSMUST00000194272 928 ntBASIC13.77□□□□□ -0.21
Timp3P39876 Gm37374-201ENSMUST00000194954 1829 ntBASIC13.77□□□□□ -0.21
Timp3P39876 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Timp3P39876 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC13.77□□□□□ -0.21
Timp3P39876 AC120002.2-201ENSMUST00000220205 773 ntBASIC13.77□□□□□ -0.21
Timp3P39876 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Timp3P39876 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Timp3P39876 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Timp3P39876 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Timp3P39876 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Timp3P39876 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Timp3P39876 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Timp3P39876 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Timp3P39876 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Timp3P39876 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC13.77□□□□□ -0.21
Timp3P39876 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Timp3P39876 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Timp3P39876 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Timp3P39876 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Timp3P39876 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Timp3P39876 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Timp3P39876 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Timp3P39876 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Timp3P39876 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Timp3P39876 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Timp3P39876 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Timp3P39876 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC13.76□□□□□ -0.21
Timp3P39876 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC13.76□□□□□ -0.21
Timp3P39876 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Timp3P39876 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Timp3P39876 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Timp3P39876 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Timp3P39876 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC13.76□□□□□ -0.21
Timp3P39876 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Timp3P39876 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Timp3P39876 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
Timp3P39876 Hivep3-201ENSMUST00000084306 2973 ntBASIC13.76□□□□□ -0.21
Timp3P39876 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Timp3P39876 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Timp3P39876 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Timp3P39876 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Timp3P39876 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Timp3P39876 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Timp3P39876 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC13.75□□□□□ -0.21
Timp3P39876 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Timp3P39876 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Timp3P39876 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Timp3P39876 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Timp3P39876 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Timp3P39876 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Timp3P39876 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Timp3P39876 Gm17661-201ENSMUST00000170317 270 ntBASIC13.75□□□□□ -0.21
Timp3P39876 Gm4217-201ENSMUST00000182243 1002 ntBASIC13.75□□□□□ -0.21
Timp3P39876 Gm27389-201ENSMUST00000183622 195 ntBASIC13.75□□□□□ -0.21
Timp3P39876 Mir1668-201ENSMUST00000184114 107 ntBASIC13.75□□□□□ -0.21
Timp3P39876 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Timp3P39876 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Timp3P39876 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Timp3P39876 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Timp3P39876 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Timp3P39876 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Timp3P39876 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Timp3P39876 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Timp3P39876 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Timp3P39876 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Timp3P39876 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Timp3P39876 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Timp3P39876 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Timp3P39876 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC13.75□□□□□ -0.21
Timp3P39876 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Timp3P39876 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Timp3P39876 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Timp3P39876 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Timp3P39876 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Timp3P39876 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Timp3P39876 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC13.74□□□□□ -0.21
Timp3P39876 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Timp3P39876 Gm37519-201ENSMUST00000191687 2210 ntBASIC13.74□□□□□ -0.21
Timp3P39876 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC13.74□□□□□ -0.21
Timp3P39876 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Timp3P39876 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Timp3P39876 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Timp3P39876 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Timp3P39876 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC13.74□□□□□ -0.21
Timp3P39876 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC13.74□□□□□ -0.21
Timp3P39876 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Timp3P39876 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Timp3P39876 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Timp3P39876 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Timp3P39876 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC13.74□□□□□ -0.21
Timp3P39876 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Timp3P39876 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Timp3P39876 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Timp3P39876 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Timp3P39876 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Timp3P39876 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Timp3P39876 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Timp3P39876 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 68.5 ms