Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Vcam1P29533 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Vcam1P29533 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Vcam1P29533 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Vcam1P29533 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Vcam1P29533 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Vcam1P29533 Gm28659-201ENSMUST00000188013 759 ntBASIC19.32■□□□□ 0.68
Vcam1P29533 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC19.32■□□□□ 0.68
Vcam1P29533 Gm44771-201ENSMUST00000206975 626 ntBASIC19.32■□□□□ 0.68
Vcam1P29533 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Vcam1P29533 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC19.32■□□□□ 0.68
Vcam1P29533 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Vcam1P29533 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Vcam1P29533 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Vcam1P29533 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Vcam1P29533 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Vcam1P29533 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Vcam1P29533 Gm11620-201ENSMUST00000118770 1845 ntBASIC19.32■□□□□ 0.68
Vcam1P29533 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Vcam1P29533 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Vcam1P29533 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Vcam1P29533 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Vcam1P29533 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Vcam1P29533 Gm7935-201ENSMUST00000100555 1278 ntBASIC19.31■□□□□ 0.68
Vcam1P29533 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC19.31■□□□□ 0.68
Vcam1P29533 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC19.31■□□□□ 0.68
Vcam1P29533 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Vcam1P29533 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Vcam1P29533 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC19.31■□□□□ 0.68
Vcam1P29533 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Vcam1P29533 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Vcam1P29533 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Vcam1P29533 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Vcam1P29533 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Vcam1P29533 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Vcam1P29533 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Vcam1P29533 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Vcam1P29533 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Vcam1P29533 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Vcam1P29533 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC19.3■□□□□ 0.68
Vcam1P29533 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Vcam1P29533 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Vcam1P29533 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Vcam1P29533 Rprl3-201ENSMUST00000157400 290 ntBASIC19.3■□□□□ 0.68
Vcam1P29533 Mir8098-201ENSMUST00000184011 137 ntBASIC19.3■□□□□ 0.68
Vcam1P29533 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Vcam1P29533 AC108846.1-201ENSMUST00000214531 513 ntBASIC19.3■□□□□ 0.68
Vcam1P29533 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Vcam1P29533 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
Vcam1P29533 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Vcam1P29533 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Vcam1P29533 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Vcam1P29533 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Vcam1P29533 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Vcam1P29533 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Vcam1P29533 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Vcam1P29533 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Vcam1P29533 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Vcam1P29533 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Vcam1P29533 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Vcam1P29533 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Vcam1P29533 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Vcam1P29533 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC19.29■□□□□ 0.68
Vcam1P29533 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC19.29■□□□□ 0.68
Vcam1P29533 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC19.29■□□□□ 0.68
Vcam1P29533 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Vcam1P29533 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Vcam1P29533 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Vcam1P29533 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Vcam1P29533 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Vcam1P29533 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Vcam1P29533 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Vcam1P29533 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Vcam1P29533 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Vcam1P29533 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Vcam1P29533 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Vcam1P29533 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Vcam1P29533 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Vcam1P29533 Gm12644-201ENSMUST00000119935 606 ntBASIC19.28■□□□□ 0.68
Vcam1P29533 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC19.28■□□□□ 0.68
Vcam1P29533 AC159301.1-201ENSMUST00000225130 1182 ntBASIC19.28■□□□□ 0.68
Vcam1P29533 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Vcam1P29533 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Vcam1P29533 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Vcam1P29533 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Vcam1P29533 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Vcam1P29533 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Vcam1P29533 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC19.28■□□□□ 0.68
Vcam1P29533 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Vcam1P29533 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Vcam1P29533 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Vcam1P29533 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Vcam1P29533 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC19.27■□□□□ 0.68
Vcam1P29533 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Vcam1P29533 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Vcam1P29533 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Vcam1P29533 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC19.27■□□□□ 0.67
Vcam1P29533 Rarb-207ENSMUST00000225921 2756 ntBASIC19.27■□□□□ 0.67
Vcam1P29533 Slc35b2-202ENSMUST00000223987 1766 ntBASIC19.27■□□□□ 0.67
Vcam1P29533 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms