Protein–RNA interactions for Protein: P28235

Gja4, Gap junction alpha-4 protein, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gja4P28235 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Gja4P28235 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Gja4P28235 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Gja4P28235 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
Gja4P28235 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
Gja4P28235 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Gja4P28235 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Gja4P28235 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Gja4P28235 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Gja4P28235 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Gja4P28235 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Gja4P28235 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Gja4P28235 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Gja4P28235 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Gja4P28235 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Gja4P28235 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Gja4P28235 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Gja4P28235 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Gja4P28235 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Gja4P28235 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC16.76■□□□□ 0.27
Gja4P28235 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC16.76■□□□□ 0.27
Gja4P28235 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Gja4P28235 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Gja4P28235 Gm8969-201ENSMUST00000199694 526 ntBASIC16.76■□□□□ 0.27
Gja4P28235 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC16.76■□□□□ 0.27
Gja4P28235 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Gja4P28235 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Gja4P28235 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Gja4P28235 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Gja4P28235 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Gja4P28235 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Gja4P28235 AL590614.2-201ENSMUST00000225374 1937 ntBASIC16.76■□□□□ 0.27
Gja4P28235 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Gja4P28235 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Gja4P28235 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Gja4P28235 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Gja4P28235 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Gja4P28235 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC16.76■□□□□ 0.27
Gja4P28235 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Gja4P28235 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Gja4P28235 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC16.75■□□□□ 0.27
Gja4P28235 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Gja4P28235 Gfra2-202ENSMUST00000227633 1480 ntBASIC16.75■□□□□ 0.27
Gja4P28235 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Gja4P28235 Dmtn-207ENSMUST00000228001 2437 ntBASIC16.75■□□□□ 0.27
Gja4P28235 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Gja4P28235 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Gja4P28235 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC16.75■□□□□ 0.27
Gja4P28235 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Gja4P28235 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC16.75■□□□□ 0.27
Gja4P28235 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC16.75■□□□□ 0.27
Gja4P28235 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Gja4P28235 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Gja4P28235 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC16.75■□□□□ 0.27
Gja4P28235 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Gja4P28235 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Gja4P28235 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Gja4P28235 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Gja4P28235 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
Gja4P28235 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC16.75■□□□□ 0.27
Gja4P28235 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Gja4P28235 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Gja4P28235 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC16.75■□□□□ 0.27
Gja4P28235 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Gja4P28235 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Gja4P28235 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Gja4P28235 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Gja4P28235 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Gja4P28235 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Gja4P28235 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Gja4P28235 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Gja4P28235 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Gja4P28235 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC16.74■□□□□ 0.27
Gja4P28235 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Gja4P28235 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC16.74■□□□□ 0.27
Gja4P28235 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC16.74■□□□□ 0.27
Gja4P28235 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Gja4P28235 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC16.74■□□□□ 0.27
Gja4P28235 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Gja4P28235 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Gja4P28235 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Gja4P28235 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Gja4P28235 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Gja4P28235 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Gja4P28235 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC16.73■□□□□ 0.27
Gja4P28235 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Gja4P28235 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Gja4P28235 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Gja4P28235 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Gja4P28235 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC16.73■□□□□ 0.27
Gja4P28235 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Gja4P28235 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Gja4P28235 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Gja4P28235 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Gja4P28235 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Gja4P28235 Gm18733-201ENSMUST00000173950 856 ntBASIC16.73■□□□□ 0.27
Gja4P28235 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC16.73■□□□□ 0.27
Gja4P28235 Gm18195-201ENSMUST00000207604 706 ntBASIC16.73■□□□□ 0.27
Gja4P28235 AW822252-206ENSMUST00000208904 237 ntBASIC16.73■□□□□ 0.27
Gja4P28235 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC16.73■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms