Protein–RNA interactions for Protein: P25799

Nfkb1, Nuclear factor NF-kappa-B p105 subunit, mousemouse

Predictions only

Length 971 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nfkb1P25799 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Nfkb1P25799 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Nfkb1P25799 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Nfkb1P25799 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Nfkb1P25799 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC17.27■□□□□ 0.36
Nfkb1P25799 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Nfkb1P25799 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Nfkb1P25799 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Nfkb1P25799 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Nfkb1P25799 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Nfkb1P25799 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Nfkb1P25799 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC17.27■□□□□ 0.35
Nfkb1P25799 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nfkb1P25799 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Nfkb1P25799 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nfkb1P25799 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nfkb1P25799 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC17.26■□□□□ 0.35
Nfkb1P25799 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nfkb1P25799 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Nfkb1P25799 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nfkb1P25799 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
Nfkb1P25799 Gm13186-201ENSMUST00000118031 316 ntBASIC17.26■□□□□ 0.35
Nfkb1P25799 Gm11336-201ENSMUST00000118168 334 ntBASIC17.26■□□□□ 0.35
Nfkb1P25799 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nfkb1P25799 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC17.26■□□□□ 0.35
Nfkb1P25799 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Nfkb1P25799 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Nfkb1P25799 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Nfkb1P25799 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nfkb1P25799 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nfkb1P25799 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Nfkb1P25799 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nfkb1P25799 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC17.26■□□□□ 0.35
Nfkb1P25799 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC17.26■□□□□ 0.35
Nfkb1P25799 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nfkb1P25799 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nfkb1P25799 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Nfkb1P25799 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nfkb1P25799 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nfkb1P25799 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nfkb1P25799 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nfkb1P25799 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nfkb1P25799 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Nfkb1P25799 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nfkb1P25799 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nfkb1P25799 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC17.25■□□□□ 0.35
Nfkb1P25799 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nfkb1P25799 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nfkb1P25799 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Nfkb1P25799 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Nfkb1P25799 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nfkb1P25799 Phf7-203ENSMUST00000226565 1971 ntBASIC17.25■□□□□ 0.35
Nfkb1P25799 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nfkb1P25799 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nfkb1P25799 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
Nfkb1P25799 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nfkb1P25799 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nfkb1P25799 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nfkb1P25799 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nfkb1P25799 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Nfkb1P25799 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC17.24■□□□□ 0.35
Nfkb1P25799 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nfkb1P25799 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC17.24■□□□□ 0.35
Nfkb1P25799 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nfkb1P25799 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Nfkb1P25799 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC17.24■□□□□ 0.35
Nfkb1P25799 Wnt10b-204ENSMUST00000226655 1807 ntBASIC17.24■□□□□ 0.35
Nfkb1P25799 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nfkb1P25799 Gm28033-201ENSMUST00000184224 96 ntBASIC17.24■□□□□ 0.35
Nfkb1P25799 AC159205.3-201ENSMUST00000224614 874 ntBASIC17.24■□□□□ 0.35
Nfkb1P25799 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nfkb1P25799 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nfkb1P25799 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nfkb1P25799 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nfkb1P25799 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nfkb1P25799 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Nfkb1P25799 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Nfkb1P25799 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nfkb1P25799 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nfkb1P25799 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nfkb1P25799 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nfkb1P25799 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nfkb1P25799 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC17.23■□□□□ 0.35
Nfkb1P25799 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nfkb1P25799 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nfkb1P25799 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nfkb1P25799 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Nfkb1P25799 Gm27742-201ENSMUST00000184667 60 ntBASIC17.23■□□□□ 0.35
Nfkb1P25799 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nfkb1P25799 Otx2os1-206ENSMUST00000228153 787 ntBASIC17.23■□□□□ 0.35
Nfkb1P25799 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nfkb1P25799 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Nfkb1P25799 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nfkb1P25799 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Nfkb1P25799 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC17.23■□□□□ 0.35
Nfkb1P25799 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nfkb1P25799 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nfkb1P25799 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Nfkb1P25799 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Nfkb1P25799 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms