Protein–RNA interactions for Protein: P23611

Irf8, Interferon regulatory factor 8, mousemouse

Predictions only

Length 424 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Irf8P23611 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Irf8P23611 Gm44450-201ENSMUST00000199528 114 ntBASIC18.14■□□□□ 0.49
Irf8P23611 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Irf8P23611 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Irf8P23611 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Irf8P23611 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Irf8P23611 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Irf8P23611 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Irf8P23611 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Irf8P23611 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Irf8P23611 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Irf8P23611 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC18.14■□□□□ 0.49
Irf8P23611 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Irf8P23611 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Irf8P23611 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Irf8P23611 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Irf8P23611 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Irf8P23611 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Irf8P23611 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Irf8P23611 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC18.13■□□□□ 0.49
Irf8P23611 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Irf8P23611 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC18.13■□□□□ 0.49
Irf8P23611 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC18.13■□□□□ 0.49
Irf8P23611 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Irf8P23611 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Irf8P23611 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Irf8P23611 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Irf8P23611 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Irf8P23611 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Irf8P23611 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Irf8P23611 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC18.13■□□□□ 0.49
Irf8P23611 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Irf8P23611 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Irf8P23611 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Irf8P23611 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Irf8P23611 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Irf8P23611 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Irf8P23611 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
Irf8P23611 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Irf8P23611 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC18.12■□□□□ 0.49
Irf8P23611 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC18.12■□□□□ 0.49
Irf8P23611 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Irf8P23611 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC18.12■□□□□ 0.49
Irf8P23611 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Irf8P23611 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Irf8P23611 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Irf8P23611 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Irf8P23611 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Irf8P23611 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Irf8P23611 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Irf8P23611 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Irf8P23611 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Irf8P23611 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Irf8P23611 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Irf8P23611 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Irf8P23611 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Irf8P23611 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Irf8P23611 AC122351.1-201ENSMUST00000220467 126 ntBASIC18.11■□□□□ 0.49
Irf8P23611 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Irf8P23611 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Irf8P23611 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Irf8P23611 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Irf8P23611 Cxcl14-202ENSMUST00000224801 1467 ntBASIC18.11■□□□□ 0.49
Irf8P23611 Gfra2-202ENSMUST00000227633 1480 ntBASIC18.11■□□□□ 0.49
Irf8P23611 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Irf8P23611 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Irf8P23611 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Irf8P23611 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Irf8P23611 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Irf8P23611 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Irf8P23611 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Irf8P23611 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Irf8P23611 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
Irf8P23611 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Irf8P23611 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Irf8P23611 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Irf8P23611 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Irf8P23611 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Irf8P23611 Zfp264-201ENSMUST00000208656 1563 ntBASIC18.1■□□□□ 0.49
Irf8P23611 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Irf8P23611 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Irf8P23611 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Irf8P23611 Gm11336-201ENSMUST00000118168 334 ntBASIC18.1■□□□□ 0.49
Irf8P23611 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC18.1■□□□□ 0.49
Irf8P23611 Gm13836-201ENSMUST00000121159 501 ntBASIC18.1■□□□□ 0.49
Irf8P23611 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC18.1■□□□□ 0.49
Irf8P23611 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Irf8P23611 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Irf8P23611 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Irf8P23611 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC18.1■□□□□ 0.49
Irf8P23611 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Irf8P23611 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Irf8P23611 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Irf8P23611 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Irf8P23611 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC18.09■□□□□ 0.49
Irf8P23611 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Irf8P23611 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Irf8P23611 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Irf8P23611 Gm36858-201ENSMUST00000194501 2391 ntBASIC18.09■□□□□ 0.49
Irf8P23611 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms