Protein–RNA interactions for Protein: P23463

Hoxd8, Homeobox protein Hox-D8, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd8P23463 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Hoxd8P23463 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Hoxd8P23463 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Hoxd8P23463 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Hoxd8P23463 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC17.33■□□□□ 0.36
Hoxd8P23463 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC17.33■□□□□ 0.36
Hoxd8P23463 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC17.33■□□□□ 0.36
Hoxd8P23463 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Hoxd8P23463 Rps4l-201ENSMUST00000071745 943 ntBASIC17.33■□□□□ 0.36
Hoxd8P23463 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC17.33■□□□□ 0.36
Hoxd8P23463 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC17.33■□□□□ 0.36
Hoxd8P23463 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC17.33■□□□□ 0.36
Hoxd8P23463 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Hoxd8P23463 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Hoxd8P23463 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Hoxd8P23463 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC17.33■□□□□ 0.36
Hoxd8P23463 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Hoxd8P23463 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Hoxd8P23463 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Hoxd8P23463 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hoxd8P23463 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC17.32■□□□□ 0.36
Hoxd8P23463 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Hoxd8P23463 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hoxd8P23463 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hoxd8P23463 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hoxd8P23463 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hoxd8P23463 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hoxd8P23463 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC17.32■□□□□ 0.36
Hoxd8P23463 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC17.32■□□□□ 0.36
Hoxd8P23463 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hoxd8P23463 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Hoxd8P23463 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Hoxd8P23463 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hoxd8P23463 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Hoxd8P23463 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Hoxd8P23463 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Hoxd8P23463 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hoxd8P23463 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hoxd8P23463 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
Hoxd8P23463 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hoxd8P23463 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
Hoxd8P23463 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
Hoxd8P23463 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hoxd8P23463 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Hoxd8P23463 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Hoxd8P23463 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Hoxd8P23463 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hoxd8P23463 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hoxd8P23463 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hoxd8P23463 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Hoxd8P23463 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hoxd8P23463 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC17.3■□□□□ 0.36
Hoxd8P23463 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hoxd8P23463 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC17.3■□□□□ 0.36
Hoxd8P23463 Gm13830-205ENSMUST00000201195 1155 ntBASIC17.3■□□□□ 0.36
Hoxd8P23463 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
Hoxd8P23463 CT009713.7-201ENSMUST00000224689 571 ntBASIC17.3■□□□□ 0.36
Hoxd8P23463 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hoxd8P23463 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hoxd8P23463 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hoxd8P23463 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC17.3■□□□□ 0.36
Hoxd8P23463 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hoxd8P23463 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hoxd8P23463 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hoxd8P23463 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hoxd8P23463 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hoxd8P23463 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Hoxd8P23463 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hoxd8P23463 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hoxd8P23463 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC17.29■□□□□ 0.36
Hoxd8P23463 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Hoxd8P23463 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Hoxd8P23463 Gm27867-201ENSMUST00000184778 125 ntBASIC17.29■□□□□ 0.36
Hoxd8P23463 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC17.29■□□□□ 0.36
Hoxd8P23463 Gm18195-201ENSMUST00000207604 706 ntBASIC17.29■□□□□ 0.36
Hoxd8P23463 AC160338.1-201ENSMUST00000214232 705 ntBASIC17.29■□□□□ 0.36
Hoxd8P23463 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC17.29■□□□□ 0.36
Hoxd8P23463 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Hoxd8P23463 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hoxd8P23463 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Hoxd8P23463 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC17.28■□□□□ 0.36
Hoxd8P23463 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC17.28■□□□□ 0.36
Hoxd8P23463 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hoxd8P23463 Gm11452-201ENSMUST00000122376 690 ntBASIC17.28■□□□□ 0.36
Hoxd8P23463 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Hoxd8P23463 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Hoxd8P23463 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hoxd8P23463 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hoxd8P23463 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Hoxd8P23463 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hoxd8P23463 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC17.28■□□□□ 0.36
Hoxd8P23463 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hoxd8P23463 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC17.28■□□□□ 0.36
Hoxd8P23463 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hoxd8P23463 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hoxd8P23463 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Hoxd8P23463 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Hoxd8P23463 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC17.27■□□□□ 0.36
Hoxd8P23463 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC17.27■□□□□ 0.36
Hoxd8P23463 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC17.27■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms