Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC14.84□□□□□ -0.03
Ccl3P10855 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC14.84□□□□□ -0.03
Ccl3P10855 AC160338.1-201ENSMUST00000214232 705 ntBASIC14.84□□□□□ -0.03
Ccl3P10855 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ccl3P10855 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Ccl3P10855 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ccl3P10855 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ccl3P10855 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ccl3P10855 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ccl3P10855 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Ccl3P10855 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
Ccl3P10855 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Ccl3P10855 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Ccl3P10855 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Ccl3P10855 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Ccl3P10855 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.03
Ccl3P10855 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
Ccl3P10855 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.03
Ccl3P10855 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Ccl3P10855 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ccl3P10855 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ccl3P10855 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Ccl3P10855 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC14.83□□□□□ -0.04
Ccl3P10855 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC14.83□□□□□ -0.04
Ccl3P10855 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Ccl3P10855 Gm44454-201ENSMUST00000198541 138 ntBASIC14.83□□□□□ -0.04
Ccl3P10855 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Ccl3P10855 Gm44430-201ENSMUST00000203376 995 ntBASIC14.83□□□□□ -0.04
Ccl3P10855 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ccl3P10855 Gm6376-201ENSMUST00000209407 580 ntBASIC14.83□□□□□ -0.04
Ccl3P10855 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ccl3P10855 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ccl3P10855 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Ccl3P10855 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ccl3P10855 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ccl3P10855 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ccl3P10855 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ccl3P10855 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Ccl3P10855 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Ccl3P10855 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Ccl3P10855 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ccl3P10855 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Ccl3P10855 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Ccl3P10855 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ccl3P10855 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC14.82□□□□□ -0.04
Ccl3P10855 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Ccl3P10855 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Ccl3P10855 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC14.82□□□□□ -0.04
Ccl3P10855 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ccl3P10855 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC14.82□□□□□ -0.04
Ccl3P10855 Gm6296-201ENSMUST00000222599 943 ntBASIC14.82□□□□□ -0.04
Ccl3P10855 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ccl3P10855 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Ccl3P10855 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Ccl3P10855 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC14.82□□□□□ -0.04
Ccl3P10855 Gfra2-202ENSMUST00000227633 1480 ntBASIC14.82□□□□□ -0.04
Ccl3P10855 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ccl3P10855 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Ccl3P10855 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ccl3P10855 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Ccl3P10855 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ccl3P10855 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Ccl3P10855 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ccl3P10855 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ccl3P10855 Gm27525-201ENSMUST00000184465 107 ntBASIC14.81□□□□□ -0.04
Ccl3P10855 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
Ccl3P10855 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
Ccl3P10855 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ccl3P10855 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ccl3P10855 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ccl3P10855 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ccl3P10855 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ccl3P10855 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ccl3P10855 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Ccl3P10855 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ccl3P10855 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ccl3P10855 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ccl3P10855 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ccl3P10855 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ccl3P10855 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC14.81□□□□□ -0.04
Ccl3P10855 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ccl3P10855 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ccl3P10855 Gm37194-201ENSMUST00000193092 3031 ntBASIC14.8□□□□□ -0.04
Ccl3P10855 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Ccl3P10855 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ccl3P10855 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ccl3P10855 Gm7862-201ENSMUST00000121461 292 ntBASIC14.8□□□□□ -0.04
Ccl3P10855 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Ccl3P10855 Gm44357-201ENSMUST00000195897 142 ntBASIC14.8□□□□□ -0.04
Ccl3P10855 Gm19658-201ENSMUST00000196231 138 ntBASIC14.8□□□□□ -0.04
Ccl3P10855 Gm44367-201ENSMUST00000196836 138 ntBASIC14.8□□□□□ -0.04
Ccl3P10855 Gm44350-201ENSMUST00000197197 138 ntBASIC14.8□□□□□ -0.04
Ccl3P10855 Gm44390-201ENSMUST00000197533 144 ntBASIC14.8□□□□□ -0.04
Ccl3P10855 Gm44313-201ENSMUST00000198018 138 ntBASIC14.8□□□□□ -0.04
Ccl3P10855 Gm44486-201ENSMUST00000198508 138 ntBASIC14.8□□□□□ -0.04
Ccl3P10855 Gm44314-201ENSMUST00000199263 138 ntBASIC14.8□□□□□ -0.04
Ccl3P10855 Gm44394-201ENSMUST00000199558 138 ntBASIC14.8□□□□□ -0.04
Ccl3P10855 Gm44484-201ENSMUST00000199873 138 ntBASIC14.8□□□□□ -0.04
Ccl3P10855 Gm44466-201ENSMUST00000200264 138 ntBASIC14.8□□□□□ -0.04
Ccl3P10855 Gm44359-201ENSMUST00000200671 138 ntBASIC14.8□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms