Protein–RNA interactions for Protein: P0C090

Rc3h2, Roquin-2, mousemouse

Known RBP Predictions only

Length 1,187 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h2P0C090 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rc3h2P0C090 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rc3h2P0C090 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rc3h2P0C090 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rc3h2P0C090 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rc3h2P0C090 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Rc3h2P0C090 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rc3h2P0C090 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rc3h2P0C090 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Rc3h2P0C090 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rc3h2P0C090 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rc3h2P0C090 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rc3h2P0C090 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Rc3h2P0C090 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rc3h2P0C090 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Rc3h2P0C090 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC17.1■□□□□ 0.33
Rc3h2P0C090 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rc3h2P0C090 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rc3h2P0C090 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rc3h2P0C090 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rc3h2P0C090 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Rc3h2P0C090 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
Rc3h2P0C090 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Rc3h2P0C090 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rc3h2P0C090 Gm6190-201ENSMUST00000220683 1374 ntBASIC17.1■□□□□ 0.33
Rc3h2P0C090 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Rc3h2P0C090 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Rc3h2P0C090 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rc3h2P0C090 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Rc3h2P0C090 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rc3h2P0C090 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Rc3h2P0C090 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC17.09■□□□□ 0.33
Rc3h2P0C090 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rc3h2P0C090 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC17.09■□□□□ 0.33
Rc3h2P0C090 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rc3h2P0C090 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rc3h2P0C090 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC17.09■□□□□ 0.33
Rc3h2P0C090 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rc3h2P0C090 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rc3h2P0C090 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rc3h2P0C090 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rc3h2P0C090 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rc3h2P0C090 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Rc3h2P0C090 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Rc3h2P0C090 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rc3h2P0C090 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rc3h2P0C090 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Rc3h2P0C090 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rc3h2P0C090 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
Rc3h2P0C090 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rc3h2P0C090 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rc3h2P0C090 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC17.08■□□□□ 0.32
Rc3h2P0C090 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC17.08■□□□□ 0.32
Rc3h2P0C090 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rc3h2P0C090 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rc3h2P0C090 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rc3h2P0C090 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC17.07■□□□□ 0.32
Rc3h2P0C090 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC17.07■□□□□ 0.32
Rc3h2P0C090 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC17.07■□□□□ 0.32
Rc3h2P0C090 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rc3h2P0C090 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rc3h2P0C090 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Rc3h2P0C090 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rc3h2P0C090 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC17.07■□□□□ 0.32
Rc3h2P0C090 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
Rc3h2P0C090 Gm44450-201ENSMUST00000199528 114 ntBASIC17.07■□□□□ 0.32
Rc3h2P0C090 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rc3h2P0C090 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rc3h2P0C090 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rc3h2P0C090 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rc3h2P0C090 Tfap2a-209ENSMUST00000225180 1828 ntBASIC17.07■□□□□ 0.32
Rc3h2P0C090 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rc3h2P0C090 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Rc3h2P0C090 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rc3h2P0C090 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
Rc3h2P0C090 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Rc3h2P0C090 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rc3h2P0C090 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rc3h2P0C090 Zkscan4-202ENSMUST00000225845 1506 ntBASIC17.06■□□□□ 0.32
Rc3h2P0C090 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC17.06■□□□□ 0.32
Rc3h2P0C090 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rc3h2P0C090 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rc3h2P0C090 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC17.06■□□□□ 0.32
Rc3h2P0C090 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Rc3h2P0C090 Gm43548-201ENSMUST00000197139 2353 ntBASIC17.06■□□□□ 0.32
Rc3h2P0C090 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rc3h2P0C090 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rc3h2P0C090 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rc3h2P0C090 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
Rc3h2P0C090 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Rc3h2P0C090 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC17.06■□□□□ 0.32
Rc3h2P0C090 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rc3h2P0C090 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Rc3h2P0C090 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rc3h2P0C090 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rc3h2P0C090 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rc3h2P0C090 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Rc3h2P0C090 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Rc3h2P0C090 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rc3h2P0C090 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms