Protein–RNA interactions for Protein: P08775

Polr2a, DNA-directed RNA polymerase II subunit RPB1, mousemouse

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr2aP08775 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Polr2aP08775 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Polr2aP08775 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC19.16■□□□□ 0.66
Polr2aP08775 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC19.16■□□□□ 0.66
Polr2aP08775 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Polr2aP08775 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Polr2aP08775 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Polr2aP08775 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Polr2aP08775 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Polr2aP08775 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Polr2aP08775 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Polr2aP08775 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Polr2aP08775 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC19.15■□□□□ 0.66
Polr2aP08775 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Polr2aP08775 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Polr2aP08775 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC19.15■□□□□ 0.66
Polr2aP08775 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC19.15■□□□□ 0.66
Polr2aP08775 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC19.15■□□□□ 0.66
Polr2aP08775 Ndufaf2-202ENSMUST00000223734 556 ntBASIC19.15■□□□□ 0.66
Polr2aP08775 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC19.15■□□□□ 0.66
Polr2aP08775 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Polr2aP08775 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Polr2aP08775 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Polr2aP08775 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC19.14■□□□□ 0.65
Polr2aP08775 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Polr2aP08775 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Polr2aP08775 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Polr2aP08775 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Polr2aP08775 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Polr2aP08775 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Polr2aP08775 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC19.13■□□□□ 0.65
Polr2aP08775 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC19.13■□□□□ 0.65
Polr2aP08775 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC19.13■□□□□ 0.65
Polr2aP08775 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Polr2aP08775 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Polr2aP08775 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Polr2aP08775 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Polr2aP08775 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Polr2aP08775 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Polr2aP08775 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC19.13■□□□□ 0.65
Polr2aP08775 Gm8097-201ENSMUST00000117903 829 ntBASIC19.13■□□□□ 0.65
Polr2aP08775 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Polr2aP08775 Chchd1-203ENSMUST00000224633 557 ntBASIC19.13■□□□□ 0.65
Polr2aP08775 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Polr2aP08775 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Polr2aP08775 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Polr2aP08775 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Polr2aP08775 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Polr2aP08775 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Polr2aP08775 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Polr2aP08775 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Polr2aP08775 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Polr2aP08775 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
Polr2aP08775 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Polr2aP08775 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC19.12■□□□□ 0.65
Polr2aP08775 Gm5682-201ENSMUST00000173402 505 ntBASIC19.12■□□□□ 0.65
Polr2aP08775 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC19.12■□□□□ 0.65
Polr2aP08775 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Polr2aP08775 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Polr2aP08775 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Polr2aP08775 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Polr2aP08775 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC19.12■□□□□ 0.65
Polr2aP08775 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Polr2aP08775 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC19.12■□□□□ 0.65
Polr2aP08775 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC19.12■□□□□ 0.65
Polr2aP08775 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Polr2aP08775 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Polr2aP08775 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Polr2aP08775 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Polr2aP08775 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Polr2aP08775 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Polr2aP08775 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Polr2aP08775 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC19.11■□□□□ 0.65
Polr2aP08775 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Polr2aP08775 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Polr2aP08775 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Polr2aP08775 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Polr2aP08775 H2af-ps-201ENSMUST00000119066 295 ntBASIC19.11■□□□□ 0.65
Polr2aP08775 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC19.11■□□□□ 0.65
Polr2aP08775 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Polr2aP08775 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Polr2aP08775 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Polr2aP08775 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Polr2aP08775 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC19.1■□□□□ 0.65
Polr2aP08775 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Polr2aP08775 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Polr2aP08775 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Polr2aP08775 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Polr2aP08775 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Polr2aP08775 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC19.1■□□□□ 0.65
Polr2aP08775 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Polr2aP08775 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Polr2aP08775 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Polr2aP08775 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Polr2aP08775 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Polr2aP08775 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC19.1■□□□□ 0.65
Polr2aP08775 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Polr2aP08775 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC19.1■□□□□ 0.65
Polr2aP08775 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Polr2aP08775 AC127349.1-201ENSMUST00000224590 266 ntBASIC19.1■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms