Protein–RNA interactions for Protein: P06327

Gm5629, Ig heavy chain V region VH558 A1/A4, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5629P06327 Gm13148-201ENSMUST00000118892 745 ntBASIC12.11□□□□□ -0.47
Gm5629P06327 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Gm5629P06327 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Gm5629P06327 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC12.11□□□□□ -0.47
Gm5629P06327 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gm5629P06327 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gm5629P06327 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Gm5629P06327 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gm5629P06327 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Gm5629P06327 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gm5629P06327 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Gm5629P06327 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC12.11□□□□□ -0.47
Gm5629P06327 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC12.11□□□□□ -0.47
Gm5629P06327 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Gm5629P06327 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Gm5629P06327 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Gm5629P06327 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Gm5629P06327 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Gm5629P06327 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Gm5629P06327 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Gm5629P06327 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Gm5629P06327 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Gm5629P06327 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Gm5629P06327 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC12.1□□□□□ -0.47
Gm5629P06327 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Gm5629P06327 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Gm5629P06327 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Gm5629P06327 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Gm5629P06327 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Gm5629P06327 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Gm5629P06327 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Gm5629P06327 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Gm5629P06327 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Gm5629P06327 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Gm5629P06327 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Gm5629P06327 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC12.1□□□□□ -0.47
Gm5629P06327 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Gm5629P06327 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Gm5629P06327 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Gm5629P06327 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Gm5629P06327 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Gm5629P06327 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Gm5629P06327 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Gm5629P06327 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Gm5629P06327 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Gm5629P06327 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Gm5629P06327 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Gm5629P06327 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Gm5629P06327 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Gm5629P06327 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC12.09□□□□□ -0.47
Gm5629P06327 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Gm5629P06327 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC12.09□□□□□ -0.47
Gm5629P06327 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC12.09□□□□□ -0.47
Gm5629P06327 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC12.09□□□□□ -0.47
Gm5629P06327 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Gm5629P06327 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Gm5629P06327 Mir5133-201ENSMUST00000174955 77 ntBASIC12.09□□□□□ -0.47
Gm5629P06327 Gm2559-201ENSMUST00000201323 363 ntBASIC12.09□□□□□ -0.47
Gm5629P06327 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Gm5629P06327 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Gm5629P06327 Gm4968-201ENSMUST00000071458 858 ntBASIC12.09□□□□□ -0.47
Gm5629P06327 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Gm5629P06327 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Gm5629P06327 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC12.09□□□□□ -0.47
Gm5629P06327 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Gm5629P06327 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Gm5629P06327 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Gm5629P06327 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC12.09□□□□□ -0.47
Gm5629P06327 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC12.09□□□□□ -0.47
Gm5629P06327 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Gm5629P06327 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Gm5629P06327 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Gm5629P06327 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC12.09□□□□□ -0.47
Gm5629P06327 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Gm5629P06327 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Gm5629P06327 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Gm5629P06327 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Gm5629P06327 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Gm5629P06327 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Gm5629P06327 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
Gm5629P06327 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Gm5629P06327 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Gm5629P06327 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC12.08□□□□□ -0.47
Gm5629P06327 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.47
Gm5629P06327 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Gm5629P06327 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC12.08□□□□□ -0.48
Gm5629P06327 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Gm5629P06327 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Gm5629P06327 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC12.08□□□□□ -0.48
Gm5629P06327 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Gm5629P06327 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Gm5629P06327 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Gm5629P06327 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Gm5629P06327 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Gm5629P06327 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Gm5629P06327 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC12.08□□□□□ -0.48
Gm5629P06327 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC12.08□□□□□ -0.48
Gm5629P06327 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Gm5629P06327 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Gm5629P06327 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms