Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Col4a1P02463 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Col4a1P02463 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Col4a1P02463 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC20.66■□□□□ 0.9
Col4a1P02463 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Col4a1P02463 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Col4a1P02463 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Col4a1P02463 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Col4a1P02463 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Col4a1P02463 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Col4a1P02463 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Col4a1P02463 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Col4a1P02463 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Col4a1P02463 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Col4a1P02463 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Col4a1P02463 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Col4a1P02463 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Col4a1P02463 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Col4a1P02463 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Col4a1P02463 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Col4a1P02463 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Col4a1P02463 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Col4a1P02463 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Col4a1P02463 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Col4a1P02463 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC20.64■□□□□ 0.9
Col4a1P02463 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Col4a1P02463 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Col4a1P02463 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Col4a1P02463 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC20.64■□□□□ 0.89
Col4a1P02463 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Col4a1P02463 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Col4a1P02463 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC20.64■□□□□ 0.89
Col4a1P02463 Gm13830-205ENSMUST00000201195 1155 ntBASIC20.64■□□□□ 0.89
Col4a1P02463 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC20.64■□□□□ 0.89
Col4a1P02463 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Col4a1P02463 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Col4a1P02463 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Col4a1P02463 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Col4a1P02463 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Col4a1P02463 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Col4a1P02463 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC20.63■□□□□ 0.89
Col4a1P02463 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Col4a1P02463 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Col4a1P02463 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Col4a1P02463 Gm8969-201ENSMUST00000199694 526 ntBASIC20.63■□□□□ 0.89
Col4a1P02463 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Col4a1P02463 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Col4a1P02463 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Col4a1P02463 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Col4a1P02463 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC20.62■□□□□ 0.89
Col4a1P02463 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Col4a1P02463 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Col4a1P02463 Gm43182-201ENSMUST00000199476 2528 ntBASIC20.62■□□□□ 0.89
Col4a1P02463 Gm5867-201ENSMUST00000063197 592 ntBASIC20.62■□□□□ 0.89
Col4a1P02463 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Col4a1P02463 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Col4a1P02463 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Col4a1P02463 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Col4a1P02463 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Col4a1P02463 Gm6376-201ENSMUST00000209407 580 ntBASIC20.61■□□□□ 0.89
Col4a1P02463 Gm10060-201ENSMUST00000212002 111 ntBASIC20.61■□□□□ 0.89
Col4a1P02463 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Col4a1P02463 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Col4a1P02463 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Col4a1P02463 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Col4a1P02463 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Col4a1P02463 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC20.61■□□□□ 0.89
Col4a1P02463 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC20.61■□□□□ 0.89
Col4a1P02463 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC20.61■□□□□ 0.89
Col4a1P02463 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Col4a1P02463 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Col4a1P02463 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Col4a1P02463 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Col4a1P02463 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Col4a1P02463 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Col4a1P02463 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Col4a1P02463 Gm25745-201ENSMUST00000174945 133 ntBASIC20.61■□□□□ 0.89
Col4a1P02463 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Col4a1P02463 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Col4a1P02463 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Col4a1P02463 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Col4a1P02463 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Col4a1P02463 Rarb-207ENSMUST00000225921 2756 ntBASIC20.6■□□□□ 0.89
Col4a1P02463 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Col4a1P02463 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Col4a1P02463 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Col4a1P02463 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Col4a1P02463 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC20.6■□□□□ 0.89
Col4a1P02463 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Col4a1P02463 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Col4a1P02463 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC20.59■□□□□ 0.89
Col4a1P02463 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Col4a1P02463 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Col4a1P02463 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC20.59■□□□□ 0.89
Col4a1P02463 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Col4a1P02463 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Col4a1P02463 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Col4a1P02463 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Col4a1P02463 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Col4a1P02463 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC20.58■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms