Protein–RNA interactions for Protein: P01788

Ig heavy chain V region H8, mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01788 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
P01788 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
P01788 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
P01788 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
P01788 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
P01788 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
P01788 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
P01788 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC13.32□□□□□ -0.28
P01788 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
P01788 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
P01788 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
P01788 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
P01788 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
P01788 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC13.32□□□□□ -0.28
P01788 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
P01788 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
P01788 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC13.32□□□□□ -0.28
P01788 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
P01788 Gm42545-201ENSMUST00000202755 922 ntBASIC13.32□□□□□ -0.28
P01788 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
P01788 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
P01788 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
P01788 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
P01788 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
P01788 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
P01788 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
P01788 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
P01788 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
P01788 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
P01788 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC13.31□□□□□ -0.28
P01788 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
P01788 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
P01788 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
P01788 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
P01788 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
P01788 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
P01788 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
P01788 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
P01788 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
P01788 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
P01788 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
P01788 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC13.31□□□□□ -0.28
P01788 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
P01788 Gm3807-201ENSMUST00000193520 1168 ntBASIC13.31□□□□□ -0.28
P01788 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
P01788 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
P01788 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
P01788 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC13.31□□□□□ -0.28
P01788 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
P01788 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
P01788 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
P01788 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
P01788 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
P01788 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
P01788 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
P01788 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
P01788 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
P01788 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
P01788 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
P01788 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
P01788 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
P01788 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
P01788 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
P01788 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
P01788 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
P01788 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
P01788 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
P01788 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
P01788 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC13.3□□□□□ -0.28
P01788 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
P01788 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC13.3□□□□□ -0.28
P01788 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
P01788 Gm21596-201ENSMUST00000178049 1316 ntBASIC13.3□□□□□ -0.28
P01788 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
P01788 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
P01788 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
P01788 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
P01788 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
P01788 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
P01788 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
P01788 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
P01788 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
P01788 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
P01788 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
P01788 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
P01788 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
P01788 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
P01788 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
P01788 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
P01788 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
P01788 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
P01788 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
P01788 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
P01788 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
P01788 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
P01788 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
P01788 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
P01788 Gm18025-201ENSMUST00000221733 862 ntBASIC13.29□□□□□ -0.28
P01788 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
P01788 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms