Protein–RNA interactions for Protein: O89029

Matn4, Matrilin-4, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Matn4O89029 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC15.9■□□□□ 0.14
Matn4O89029 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
Matn4O89029 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Matn4O89029 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Matn4O89029 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Matn4O89029 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Matn4O89029 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Matn4O89029 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Matn4O89029 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Matn4O89029 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
Matn4O89029 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Matn4O89029 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC15.89■□□□□ 0.13
Matn4O89029 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Matn4O89029 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Matn4O89029 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Matn4O89029 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Matn4O89029 H2-K2-201ENSMUST00000174250 1049 ntBASIC15.89■□□□□ 0.13
Matn4O89029 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC15.89■□□□□ 0.13
Matn4O89029 Gm18666-201ENSMUST00000190039 958 ntBASIC15.89■□□□□ 0.13
Matn4O89029 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Matn4O89029 Gm10602-201ENSMUST00000098239 609 ntBASIC15.89■□□□□ 0.13
Matn4O89029 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Matn4O89029 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Matn4O89029 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Matn4O89029 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Matn4O89029 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Matn4O89029 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Matn4O89029 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Matn4O89029 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Matn4O89029 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Matn4O89029 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Matn4O89029 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Matn4O89029 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Matn4O89029 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC15.88■□□□□ 0.13
Matn4O89029 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC15.88■□□□□ 0.13
Matn4O89029 Gm20049-201ENSMUST00000219950 730 ntBASIC15.88■□□□□ 0.13
Matn4O89029 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Matn4O89029 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Matn4O89029 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC15.88■□□□□ 0.13
Matn4O89029 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Matn4O89029 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Matn4O89029 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Matn4O89029 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Matn4O89029 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Matn4O89029 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Matn4O89029 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Matn4O89029 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Matn4O89029 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Matn4O89029 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Matn4O89029 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC15.87■□□□□ 0.13
Matn4O89029 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Matn4O89029 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Matn4O89029 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Matn4O89029 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Matn4O89029 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Matn4O89029 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Matn4O89029 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC15.87■□□□□ 0.13
Matn4O89029 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Matn4O89029 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Matn4O89029 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Matn4O89029 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Matn4O89029 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Matn4O89029 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Matn4O89029 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Matn4O89029 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Matn4O89029 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Matn4O89029 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Matn4O89029 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Matn4O89029 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC15.86■□□□□ 0.13
Matn4O89029 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Matn4O89029 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Matn4O89029 CT010478.1-201ENSMUST00000220747 2787 ntBASIC15.86■□□□□ 0.13
Matn4O89029 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC15.86■□□□□ 0.13
Matn4O89029 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Matn4O89029 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC15.86■□□□□ 0.13
Matn4O89029 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC15.86■□□□□ 0.13
Matn4O89029 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC15.86■□□□□ 0.13
Matn4O89029 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Matn4O89029 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Matn4O89029 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Matn4O89029 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Matn4O89029 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Matn4O89029 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Matn4O89029 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Matn4O89029 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Matn4O89029 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Matn4O89029 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
Matn4O89029 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Matn4O89029 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Matn4O89029 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Matn4O89029 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC15.85■□□□□ 0.13
Matn4O89029 Gm9731-201ENSMUST00000209480 747 ntBASIC15.85■□□□□ 0.13
Matn4O89029 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Matn4O89029 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Matn4O89029 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Matn4O89029 Gm43072-201ENSMUST00000200283 1671 ntBASIC15.85■□□□□ 0.13
Matn4O89029 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Matn4O89029 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Matn4O89029 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Matn4O89029 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms