Protein–RNA interactions for Protein: O89016

Abcd4, ATP-binding cassette sub-family D member 4, mousemouse

Predictions only

Length 606 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcd4O89016 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Abcd4O89016 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Abcd4O89016 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Abcd4O89016 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Abcd4O89016 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Abcd4O89016 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Abcd4O89016 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.03
Abcd4O89016 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Abcd4O89016 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Abcd4O89016 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Abcd4O89016 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
Abcd4O89016 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Abcd4O89016 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
Abcd4O89016 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
Abcd4O89016 Gm14859-201ENSMUST00000117752 357 ntBASIC15.22■□□□□ 0.03
Abcd4O89016 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Abcd4O89016 Gm25016-201ENSMUST00000158399 131 ntBASIC15.22■□□□□ 0.03
Abcd4O89016 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Abcd4O89016 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Abcd4O89016 Gm6345-202ENSMUST00000180900 204 ntBASIC15.22■□□□□ 0.03
Abcd4O89016 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Abcd4O89016 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC15.22■□□□□ 0.03
Abcd4O89016 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Abcd4O89016 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Abcd4O89016 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Abcd4O89016 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
Abcd4O89016 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Abcd4O89016 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Abcd4O89016 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Abcd4O89016 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC15.22■□□□□ 0.03
Abcd4O89016 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Abcd4O89016 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Abcd4O89016 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Abcd4O89016 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Abcd4O89016 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Abcd4O89016 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Abcd4O89016 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Abcd4O89016 Hivep3-201ENSMUST00000084306 2973 ntBASIC15.21■□□□□ 0.03
Abcd4O89016 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Abcd4O89016 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC15.21■□□□□ 0.03
Abcd4O89016 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Abcd4O89016 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Abcd4O89016 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Abcd4O89016 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Abcd4O89016 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Abcd4O89016 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Abcd4O89016 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Abcd4O89016 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Abcd4O89016 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Abcd4O89016 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Abcd4O89016 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC15.21■□□□□ 0.03
Abcd4O89016 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC15.21■□□□□ 0.03
Abcd4O89016 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Abcd4O89016 AC120002.2-201ENSMUST00000220205 773 ntBASIC15.21■□□□□ 0.03
Abcd4O89016 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC15.21■□□□□ 0.03
Abcd4O89016 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Abcd4O89016 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Abcd4O89016 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Abcd4O89016 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Abcd4O89016 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Abcd4O89016 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Abcd4O89016 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
Abcd4O89016 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC15.21■□□□□ 0.02
Abcd4O89016 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Abcd4O89016 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Abcd4O89016 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Abcd4O89016 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Abcd4O89016 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC15.2■□□□□ 0.02
Abcd4O89016 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Abcd4O89016 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Abcd4O89016 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Abcd4O89016 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Abcd4O89016 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Abcd4O89016 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Abcd4O89016 Gm43808-201ENSMUST00000202534 2065 ntBASIC15.2■□□□□ 0.02
Abcd4O89016 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Abcd4O89016 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Abcd4O89016 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Abcd4O89016 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
Abcd4O89016 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC15.2■□□□□ 0.02
Abcd4O89016 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Abcd4O89016 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Abcd4O89016 Gm17661-201ENSMUST00000170317 270 ntBASIC15.2■□□□□ 0.02
Abcd4O89016 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Abcd4O89016 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Abcd4O89016 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Abcd4O89016 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Abcd4O89016 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Abcd4O89016 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Abcd4O89016 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Abcd4O89016 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Abcd4O89016 Spsb2-203ENSMUST00000112473 1322 ntBASIC15.19■□□□□ 0.02
Abcd4O89016 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Abcd4O89016 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Abcd4O89016 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Abcd4O89016 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Abcd4O89016 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Abcd4O89016 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC15.19■□□□□ 0.02
Abcd4O89016 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC15.19■□□□□ 0.02
Abcd4O89016 Mir1668-201ENSMUST00000184114 107 ntBASIC15.19■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms