Protein–RNA interactions for Protein: O88895

Hdac3, Histone deacetylase 3, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac3O88895 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Hdac3O88895 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Hdac3O88895 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Hdac3O88895 CT010444.2-201ENSMUST00000217877 1629 ntBASIC15.04■□□□□ -0
Hdac3O88895 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Hdac3O88895 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC15.04■□□□□ -0
Hdac3O88895 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC15.04■□□□□ -0
Hdac3O88895 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Hdac3O88895 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC15.04■□□□□ -0
Hdac3O88895 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC15.04■□□□□ -0
Hdac3O88895 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC15.04■□□□□ -0
Hdac3O88895 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Hdac3O88895 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC15.04■□□□□ -0
Hdac3O88895 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Hdac3O88895 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Hdac3O88895 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC15.04■□□□□ -0
Hdac3O88895 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Hdac3O88895 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Hdac3O88895 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC15.04■□□□□ -0
Hdac3O88895 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Hdac3O88895 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC15.03■□□□□ -0
Hdac3O88895 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Hdac3O88895 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Hdac3O88895 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Hdac3O88895 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Hdac3O88895 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -0
Hdac3O88895 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC15.03■□□□□ -0
Hdac3O88895 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Hdac3O88895 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
Hdac3O88895 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC15.03■□□□□ -0
Hdac3O88895 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Hdac3O88895 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC15.03■□□□□ -0
Hdac3O88895 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Hdac3O88895 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Hdac3O88895 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC15.03■□□□□ -0
Hdac3O88895 Gm10517-202ENSMUST00000192970 758 ntBASIC15.03■□□□□ -0
Hdac3O88895 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Hdac3O88895 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Hdac3O88895 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Hdac3O88895 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Hdac3O88895 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Hdac3O88895 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC15.03■□□□□ -0
Hdac3O88895 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC15.02■□□□□ -0
Hdac3O88895 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Hdac3O88895 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Hdac3O88895 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Hdac3O88895 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Hdac3O88895 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Hdac3O88895 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC15.02■□□□□ -0
Hdac3O88895 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Hdac3O88895 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC15.02■□□□□ -0
Hdac3O88895 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Hdac3O88895 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Hdac3O88895 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC15.02■□□□□ -0
Hdac3O88895 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Hdac3O88895 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Hdac3O88895 Mir1199-201ENSMUST00000117015 119 ntBASIC15.02■□□□□ -0
Hdac3O88895 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Hdac3O88895 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC15.02■□□□□ -0
Hdac3O88895 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC15.02■□□□□ -0
Hdac3O88895 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Hdac3O88895 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
Hdac3O88895 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC15.02■□□□□ -0
Hdac3O88895 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC15.02■□□□□ -0
Hdac3O88895 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Hdac3O88895 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Hdac3O88895 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC15.02□□□□□ -0.01
Hdac3O88895 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC15.02□□□□□ -0.01
Hdac3O88895 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC15.02□□□□□ -0.01
Hdac3O88895 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Hdac3O88895 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Hdac3O88895 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Hdac3O88895 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
Hdac3O88895 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Hdac3O88895 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Hdac3O88895 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Hdac3O88895 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Hdac3O88895 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Hdac3O88895 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Hdac3O88895 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC15.01□□□□□ -0.01
Hdac3O88895 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Hdac3O88895 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Hdac3O88895 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC15.01□□□□□ -0.01
Hdac3O88895 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC15.01□□□□□ -0.01
Hdac3O88895 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Hdac3O88895 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
Hdac3O88895 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Hdac3O88895 Gm9694-201ENSMUST00000193347 1189 ntBASIC15.01□□□□□ -0.01
Hdac3O88895 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC15.01□□□□□ -0.01
Hdac3O88895 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC15.01□□□□□ -0.01
Hdac3O88895 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Hdac3O88895 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Hdac3O88895 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC15.01□□□□□ -0.01
Hdac3O88895 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Hdac3O88895 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Hdac3O88895 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Hdac3O88895 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
Hdac3O88895 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC15.01□□□□□ -0.01
Hdac3O88895 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Hdac3O88895 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 47.4 ms