Protein–RNA interactions for Protein: O88879

Apaf1, Apoptotic protease-activating factor 1, mousemouse

Predictions only

Length 1,249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Apaf1O88879 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
Apaf1O88879 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Apaf1O88879 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Apaf1O88879 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Apaf1O88879 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Apaf1O88879 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
Apaf1O88879 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC21.86■■□□□ 1.09
Apaf1O88879 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Apaf1O88879 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC21.86■■□□□ 1.09
Apaf1O88879 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
Apaf1O88879 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Apaf1O88879 Gm18115-201ENSMUST00000221209 621 ntBASIC21.86■■□□□ 1.09
Apaf1O88879 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Apaf1O88879 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
Apaf1O88879 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC21.86■■□□□ 1.09
Apaf1O88879 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Apaf1O88879 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Apaf1O88879 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Apaf1O88879 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Apaf1O88879 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Apaf1O88879 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
Apaf1O88879 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Apaf1O88879 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
Apaf1O88879 Gfra2-202ENSMUST00000227633 1480 ntBASIC21.85■■□□□ 1.09
Apaf1O88879 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Apaf1O88879 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Apaf1O88879 Gm33142-201ENSMUST00000193913 867 ntBASIC21.85■■□□□ 1.09
Apaf1O88879 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC21.85■■□□□ 1.09
Apaf1O88879 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
Apaf1O88879 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC21.85■■□□□ 1.09
Apaf1O88879 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Apaf1O88879 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Apaf1O88879 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Apaf1O88879 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Apaf1O88879 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Apaf1O88879 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC21.84■■□□□ 1.09
Apaf1O88879 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Apaf1O88879 AC122351.1-201ENSMUST00000220467 126 ntBASIC21.84■■□□□ 1.09
Apaf1O88879 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Apaf1O88879 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Apaf1O88879 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC21.84■■□□□ 1.09
Apaf1O88879 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Apaf1O88879 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.09
Apaf1O88879 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Apaf1O88879 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Apaf1O88879 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC21.83■■□□□ 1.09
Apaf1O88879 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
Apaf1O88879 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC21.83■■□□□ 1.09
Apaf1O88879 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC21.83■■□□□ 1.09
Apaf1O88879 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Apaf1O88879 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Apaf1O88879 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Apaf1O88879 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.08
Apaf1O88879 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Apaf1O88879 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.08
Apaf1O88879 Cxcl14-202ENSMUST00000224801 1467 ntBASIC21.83■■□□□ 1.08
Apaf1O88879 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Apaf1O88879 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
Apaf1O88879 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.08
Apaf1O88879 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Apaf1O88879 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Apaf1O88879 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
Apaf1O88879 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Apaf1O88879 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Apaf1O88879 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
Apaf1O88879 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Apaf1O88879 Zkscan4-202ENSMUST00000225845 1506 ntBASIC21.82■■□□□ 1.08
Apaf1O88879 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Apaf1O88879 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Apaf1O88879 Gm6623-201ENSMUST00000173570 544 ntBASIC21.82■■□□□ 1.08
Apaf1O88879 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Apaf1O88879 Gm21362-201ENSMUST00000194272 928 ntBASIC21.82■■□□□ 1.08
Apaf1O88879 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC21.82■■□□□ 1.08
Apaf1O88879 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Apaf1O88879 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
Apaf1O88879 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Apaf1O88879 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Apaf1O88879 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
Apaf1O88879 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Apaf1O88879 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Apaf1O88879 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Apaf1O88879 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Apaf1O88879 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Apaf1O88879 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Apaf1O88879 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Apaf1O88879 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
Apaf1O88879 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Apaf1O88879 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC21.81■■□□□ 1.08
Apaf1O88879 Gm18421-201ENSMUST00000204122 625 ntBASIC21.81■■□□□ 1.08
Apaf1O88879 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
Apaf1O88879 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Apaf1O88879 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Apaf1O88879 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
Apaf1O88879 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Apaf1O88879 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Apaf1O88879 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Apaf1O88879 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Apaf1O88879 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Apaf1O88879 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Apaf1O88879 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms