Protein–RNA interactions for Protein: O88705

Hcn3, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3, mousemouse

Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn3O88705 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
Hcn3O88705 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Hcn3O88705 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC16.13■□□□□ 0.17
Hcn3O88705 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Hcn3O88705 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Hcn3O88705 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Hcn3O88705 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Hcn3O88705 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Hcn3O88705 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
Hcn3O88705 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Hcn3O88705 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Hcn3O88705 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Hcn3O88705 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Hcn3O88705 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Hcn3O88705 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Hcn3O88705 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC16.12■□□□□ 0.17
Hcn3O88705 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Hcn3O88705 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Hcn3O88705 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Hcn3O88705 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Hcn3O88705 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Hcn3O88705 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Hcn3O88705 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Hcn3O88705 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC16.12■□□□□ 0.17
Hcn3O88705 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Hcn3O88705 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC16.12■□□□□ 0.17
Hcn3O88705 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC16.12■□□□□ 0.17
Hcn3O88705 Gm44549-201ENSMUST00000208351 577 ntBASIC16.12■□□□□ 0.17
Hcn3O88705 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Hcn3O88705 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Hcn3O88705 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Hcn3O88705 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Hcn3O88705 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Hcn3O88705 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Hcn3O88705 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Hcn3O88705 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Hcn3O88705 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Hcn3O88705 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Hcn3O88705 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Hcn3O88705 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Hcn3O88705 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Hcn3O88705 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Hcn3O88705 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Hcn3O88705 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Hcn3O88705 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Hcn3O88705 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Hcn3O88705 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Hcn3O88705 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Hcn3O88705 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Hcn3O88705 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
Hcn3O88705 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC16.11■□□□□ 0.17
Hcn3O88705 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC16.11■□□□□ 0.17
Hcn3O88705 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
Hcn3O88705 Gm12441-201ENSMUST00000121806 588 ntBASIC16.11■□□□□ 0.17
Hcn3O88705 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC16.11■□□□□ 0.17
Hcn3O88705 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Hcn3O88705 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Hcn3O88705 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Hcn3O88705 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Hcn3O88705 Zfp783-201ENSMUST00000095946 670 ntBASIC16.11■□□□□ 0.17
Hcn3O88705 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Hcn3O88705 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Hcn3O88705 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Hcn3O88705 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Hcn3O88705 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Hcn3O88705 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Hcn3O88705 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Hcn3O88705 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Hcn3O88705 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Hcn3O88705 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Hcn3O88705 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Hcn3O88705 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Hcn3O88705 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Hcn3O88705 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Hcn3O88705 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Hcn3O88705 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC16.1■□□□□ 0.17
Hcn3O88705 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Hcn3O88705 Gm5297-201ENSMUST00000198555 1171 ntBASIC16.1■□□□□ 0.17
Hcn3O88705 CT025689.6-201ENSMUST00000224991 1104 ntBASIC16.1■□□□□ 0.17
Hcn3O88705 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Hcn3O88705 Gm43072-201ENSMUST00000200283 1671 ntBASIC16.1■□□□□ 0.17
Hcn3O88705 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Hcn3O88705 Gm19721-201ENSMUST00000195284 1764 ntBASIC16.1■□□□□ 0.17
Hcn3O88705 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Hcn3O88705 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Hcn3O88705 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Hcn3O88705 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Hcn3O88705 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Hcn3O88705 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Hcn3O88705 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Hcn3O88705 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Hcn3O88705 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC16.09■□□□□ 0.17
Hcn3O88705 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Hcn3O88705 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Hcn3O88705 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC16.09■□□□□ 0.17
Hcn3O88705 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Hcn3O88705 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Hcn3O88705 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Hcn3O88705 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
Hcn3O88705 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC16.09■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 58.3 ms