Protein–RNA interactions for Protein: O88427

Cacna1h, Voltage-dependent T-type calcium channel subunit alpha-1H, mousemouse

Predictions only

Length 2,365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1hO88427 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC16.34■□□□□ 0.21
Cacna1hO88427 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cacna1hO88427 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cacna1hO88427 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Cacna1hO88427 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Cacna1hO88427 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC16.34■□□□□ 0.21
Cacna1hO88427 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC16.34■□□□□ 0.21
Cacna1hO88427 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC16.34■□□□□ 0.21
Cacna1hO88427 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Cacna1hO88427 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Cacna1hO88427 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC16.34■□□□□ 0.21
Cacna1hO88427 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC16.34■□□□□ 0.21
Cacna1hO88427 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
Cacna1hO88427 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Cacna1hO88427 AC131187.1-201ENSMUST00000224567 809 ntBASIC16.34■□□□□ 0.21
Cacna1hO88427 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cacna1hO88427 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Cacna1hO88427 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Cacna1hO88427 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Cacna1hO88427 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Cacna1hO88427 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Cacna1hO88427 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Cacna1hO88427 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Cacna1hO88427 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Cacna1hO88427 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Cacna1hO88427 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Cacna1hO88427 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cacna1hO88427 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cacna1hO88427 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cacna1hO88427 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
Cacna1hO88427 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Cacna1hO88427 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cacna1hO88427 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cacna1hO88427 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cacna1hO88427 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC16.33■□□□□ 0.2
Cacna1hO88427 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cacna1hO88427 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cacna1hO88427 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC16.33■□□□□ 0.2
Cacna1hO88427 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Cacna1hO88427 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC16.33■□□□□ 0.2
Cacna1hO88427 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cacna1hO88427 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cacna1hO88427 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Cacna1hO88427 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cacna1hO88427 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cacna1hO88427 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC16.33■□□□□ 0.2
Cacna1hO88427 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cacna1hO88427 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC16.33■□□□□ 0.2
Cacna1hO88427 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Cacna1hO88427 AC154572.2-201ENSMUST00000225105 997 ntBASIC16.33■□□□□ 0.2
Cacna1hO88427 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cacna1hO88427 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cacna1hO88427 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cacna1hO88427 Gm3928-201ENSMUST00000121141 1307 ntBASIC16.32■□□□□ 0.2
Cacna1hO88427 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cacna1hO88427 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC16.32■□□□□ 0.2
Cacna1hO88427 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cacna1hO88427 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC16.32■□□□□ 0.2
Cacna1hO88427 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
Cacna1hO88427 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cacna1hO88427 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Cacna1hO88427 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Cacna1hO88427 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC16.32■□□□□ 0.2
Cacna1hO88427 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cacna1hO88427 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cacna1hO88427 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Cacna1hO88427 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cacna1hO88427 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC16.32■□□□□ 0.2
Cacna1hO88427 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Cacna1hO88427 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cacna1hO88427 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC16.31■□□□□ 0.2
Cacna1hO88427 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Cacna1hO88427 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cacna1hO88427 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Cacna1hO88427 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Cacna1hO88427 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC16.31■□□□□ 0.2
Cacna1hO88427 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Cacna1hO88427 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cacna1hO88427 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Cacna1hO88427 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Cacna1hO88427 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cacna1hO88427 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cacna1hO88427 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cacna1hO88427 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Cacna1hO88427 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
Cacna1hO88427 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC16.31■□□□□ 0.2
Cacna1hO88427 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cacna1hO88427 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Cacna1hO88427 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Cacna1hO88427 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cacna1hO88427 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Cacna1hO88427 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cacna1hO88427 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Cacna1hO88427 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Cacna1hO88427 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Cacna1hO88427 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
Cacna1hO88427 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cacna1hO88427 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cacna1hO88427 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cacna1hO88427 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms