Protein–RNA interactions for Protein: O88413

Tulp3, Tubby-related protein 3, mousemouse

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tulp3O88413 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
Tulp3O88413 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Tulp3O88413 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Tulp3O88413 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Tulp3O88413 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Tulp3O88413 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC15.72■□□□□ 0.11
Tulp3O88413 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Tulp3O88413 Gm44672-201ENSMUST00000206944 1098 ntBASIC15.72■□□□□ 0.11
Tulp3O88413 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC15.72■□□□□ 0.11
Tulp3O88413 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Tulp3O88413 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC15.72■□□□□ 0.11
Tulp3O88413 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Tulp3O88413 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Tulp3O88413 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Tulp3O88413 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Tulp3O88413 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Tulp3O88413 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Tulp3O88413 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Tulp3O88413 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Tulp3O88413 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Tulp3O88413 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Tulp3O88413 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Tulp3O88413 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Tulp3O88413 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Tulp3O88413 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Tulp3O88413 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC15.71■□□□□ 0.11
Tulp3O88413 AC122769.4-201ENSMUST00000228166 901 ntBASIC15.71■□□□□ 0.11
Tulp3O88413 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Tulp3O88413 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Tulp3O88413 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Tulp3O88413 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Tulp3O88413 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Tulp3O88413 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Tulp3O88413 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
Tulp3O88413 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Tulp3O88413 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC15.71■□□□□ 0.1
Tulp3O88413 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
Tulp3O88413 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Tulp3O88413 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Tulp3O88413 Gm5421-201ENSMUST00000181698 2354 ntBASIC15.7■□□□□ 0.1
Tulp3O88413 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Tulp3O88413 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Tulp3O88413 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Tulp3O88413 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Tulp3O88413 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC15.7■□□□□ 0.1
Tulp3O88413 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Tulp3O88413 Alkbh1-212ENSMUST00000185301 408 ntBASIC15.7■□□□□ 0.1
Tulp3O88413 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC15.7■□□□□ 0.1
Tulp3O88413 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Tulp3O88413 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Tulp3O88413 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Tulp3O88413 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Tulp3O88413 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Tulp3O88413 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Tulp3O88413 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Tulp3O88413 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Tulp3O88413 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC15.69■□□□□ 0.1
Tulp3O88413 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Tulp3O88413 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Tulp3O88413 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Tulp3O88413 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tulp3O88413 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tulp3O88413 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tulp3O88413 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tulp3O88413 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tulp3O88413 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tulp3O88413 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Tulp3O88413 Gm18284-201ENSMUST00000172604 624 ntBASIC15.69■□□□□ 0.1
Tulp3O88413 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Tulp3O88413 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tulp3O88413 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tulp3O88413 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
Tulp3O88413 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Tulp3O88413 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Tulp3O88413 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tulp3O88413 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Tulp3O88413 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tulp3O88413 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Tulp3O88413 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Tulp3O88413 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Tulp3O88413 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tulp3O88413 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tulp3O88413 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tulp3O88413 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
Tulp3O88413 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Tulp3O88413 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tulp3O88413 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tulp3O88413 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Tulp3O88413 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tulp3O88413 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tulp3O88413 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Tulp3O88413 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tulp3O88413 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tulp3O88413 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tulp3O88413 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC15.68■□□□□ 0.1
Tulp3O88413 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC15.68■□□□□ 0.1
Tulp3O88413 AC166341.7-201ENSMUST00000221698 126 ntBASIC15.68■□□□□ 0.1
Tulp3O88413 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tulp3O88413 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tulp3O88413 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms