Protein–RNA interactions for Protein: O88245

Gm10139, Mszf85 (Fragment), mousemouse

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm10139O88245 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Gm10139O88245 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
Gm10139O88245 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Gm10139O88245 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC10.26□□□□□ -0.77
Gm10139O88245 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Gm10139O88245 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Gm10139O88245 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Gm10139O88245 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Gm10139O88245 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Gm10139O88245 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC10.25□□□□□ -0.77
Gm10139O88245 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
Gm10139O88245 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Gm10139O88245 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC10.25□□□□□ -0.77
Gm10139O88245 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Gm10139O88245 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Gm10139O88245 Gm7638-201ENSMUST00000121348 967 ntBASIC10.25□□□□□ -0.77
Gm10139O88245 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Gm10139O88245 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC10.25□□□□□ -0.77
Gm10139O88245 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC10.25□□□□□ -0.77
Gm10139O88245 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC10.25□□□□□ -0.77
Gm10139O88245 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
Gm10139O88245 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Gm10139O88245 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Gm10139O88245 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Gm10139O88245 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Gm10139O88245 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Gm10139O88245 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Gm10139O88245 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC10.25□□□□□ -0.77
Gm10139O88245 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Gm10139O88245 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Gm10139O88245 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC10.25□□□□□ -0.77
Gm10139O88245 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Gm10139O88245 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Gm10139O88245 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Gm10139O88245 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
Gm10139O88245 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
Gm10139O88245 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Gm10139O88245 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Gm10139O88245 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Gm10139O88245 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC10.24□□□□□ -0.77
Gm10139O88245 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Gm10139O88245 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Gm10139O88245 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC10.24□□□□□ -0.77
Gm10139O88245 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Gm10139O88245 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Gm10139O88245 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Gm10139O88245 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Gm10139O88245 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
Gm10139O88245 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
Gm10139O88245 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC10.24□□□□□ -0.77
Gm10139O88245 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC10.24□□□□□ -0.77
Gm10139O88245 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC10.24□□□□□ -0.77
Gm10139O88245 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Gm10139O88245 Gm38027-201ENSMUST00000192315 235 ntBASIC10.24□□□□□ -0.77
Gm10139O88245 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC10.24□□□□□ -0.77
Gm10139O88245 AC120002.2-201ENSMUST00000220205 773 ntBASIC10.24□□□□□ -0.77
Gm10139O88245 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Gm10139O88245 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Gm10139O88245 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Gm10139O88245 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Gm10139O88245 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Gm10139O88245 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC10.24□□□□□ -0.77
Gm10139O88245 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Gm10139O88245 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Gm10139O88245 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Gm10139O88245 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC10.24□□□□□ -0.77
Gm10139O88245 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Gm10139O88245 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Gm10139O88245 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Gm10139O88245 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Gm10139O88245 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
Gm10139O88245 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Gm10139O88245 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Gm10139O88245 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Gm10139O88245 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Gm10139O88245 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
Gm10139O88245 Gm7712-202ENSMUST00000222331 1510 ntBASIC10.23□□□□□ -0.77
Gm10139O88245 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Gm10139O88245 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Gm10139O88245 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
Gm10139O88245 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Gm10139O88245 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Gm10139O88245 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Gm10139O88245 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Gm10139O88245 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC10.23□□□□□ -0.77
Gm10139O88245 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
Gm10139O88245 Gm12085-201ENSMUST00000119263 940 ntBASIC10.23□□□□□ -0.77
Gm10139O88245 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Gm10139O88245 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
Gm10139O88245 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC10.23□□□□□ -0.77
Gm10139O88245 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC10.23□□□□□ -0.77
Gm10139O88245 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Gm10139O88245 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Gm10139O88245 Slc35b2-207ENSMUST00000226086 850 ntBASIC10.23□□□□□ -0.77
Gm10139O88245 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC10.23□□□□□ -0.77
Gm10139O88245 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Gm10139O88245 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC10.23□□□□□ -0.77
Gm10139O88245 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Gm10139O88245 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
Gm10139O88245 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms