Protein–RNA interactions for Protein: O88196

Ttc3, E3 ubiquitin-protein ligase TTC3, mousemouse

Known RBP Predictions only

Length 1,979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc3O88196 Gm27867-201ENSMUST00000184778 125 ntBASIC17.59■□□□□ 0.41
Ttc3O88196 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ttc3O88196 Gm44771-201ENSMUST00000206975 626 ntBASIC17.59■□□□□ 0.41
Ttc3O88196 Mzt1-203ENSMUST00000227948 952 ntBASIC17.59■□□□□ 0.41
Ttc3O88196 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Ttc3O88196 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
Ttc3O88196 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC17.58■□□□□ 0.41
Ttc3O88196 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ttc3O88196 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC17.58■□□□□ 0.4
Ttc3O88196 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ttc3O88196 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ttc3O88196 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Ttc3O88196 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ttc3O88196 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ttc3O88196 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Ttc3O88196 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC17.58■□□□□ 0.4
Ttc3O88196 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
Ttc3O88196 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC17.58■□□□□ 0.4
Ttc3O88196 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC17.58■□□□□ 0.4
Ttc3O88196 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ttc3O88196 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ttc3O88196 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ttc3O88196 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ttc3O88196 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ttc3O88196 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ttc3O88196 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ttc3O88196 Slc35b2-202ENSMUST00000223987 1766 ntBASIC17.58■□□□□ 0.4
Ttc3O88196 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ttc3O88196 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ttc3O88196 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Ttc3O88196 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
Ttc3O88196 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Ttc3O88196 Rprl3-201ENSMUST00000157400 290 ntBASIC17.57■□□□□ 0.4
Ttc3O88196 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC17.57■□□□□ 0.4
Ttc3O88196 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ttc3O88196 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ttc3O88196 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ttc3O88196 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ttc3O88196 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Ttc3O88196 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ttc3O88196 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ttc3O88196 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ttc3O88196 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Ttc3O88196 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ttc3O88196 Gm12644-201ENSMUST00000119935 606 ntBASIC17.57■□□□□ 0.4
Ttc3O88196 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Ttc3O88196 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Ttc3O88196 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ttc3O88196 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ttc3O88196 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Ttc3O88196 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC17.57■□□□□ 0.4
Ttc3O88196 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ttc3O88196 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ttc3O88196 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Ttc3O88196 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ttc3O88196 Gm43702-201ENSMUST00000198772 2546 ntBASIC17.56■□□□□ 0.4
Ttc3O88196 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ttc3O88196 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC17.56■□□□□ 0.4
Ttc3O88196 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ttc3O88196 Gm7935-201ENSMUST00000100555 1278 ntBASIC17.56■□□□□ 0.4
Ttc3O88196 Gm12895-201ENSMUST00000122214 226 ntBASIC17.56■□□□□ 0.4
Ttc3O88196 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC17.56■□□□□ 0.4
Ttc3O88196 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ttc3O88196 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ttc3O88196 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ttc3O88196 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Ttc3O88196 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ttc3O88196 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Ttc3O88196 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ttc3O88196 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ttc3O88196 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ttc3O88196 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Ttc3O88196 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ttc3O88196 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ttc3O88196 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Ttc3O88196 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC17.55■□□□□ 0.4
Ttc3O88196 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Ttc3O88196 Gm43347-201ENSMUST00000200226 580 ntBASIC17.55■□□□□ 0.4
Ttc3O88196 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Ttc3O88196 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ttc3O88196 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC17.55■□□□□ 0.4
Ttc3O88196 Gm15442-201ENSMUST00000117905 1527 ntBASIC17.55■□□□□ 0.4
Ttc3O88196 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ttc3O88196 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC17.55■□□□□ 0.4
Ttc3O88196 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Ttc3O88196 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ttc3O88196 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ttc3O88196 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ttc3O88196 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ttc3O88196 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ttc3O88196 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ttc3O88196 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC17.55■□□□□ 0.4
Ttc3O88196 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ttc3O88196 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ttc3O88196 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ttc3O88196 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ttc3O88196 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Ttc3O88196 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ttc3O88196 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Ttc3O88196 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms