Protein–RNA interactions for Protein: O70209

Pdlim3, PDZ and LIM domain protein 3, mousemouse

Known RBP Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim3O70209 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Pdlim3O70209 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pdlim3O70209 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pdlim3O70209 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pdlim3O70209 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pdlim3O70209 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Pdlim3O70209 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pdlim3O70209 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pdlim3O70209 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pdlim3O70209 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pdlim3O70209 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pdlim3O70209 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.04
Pdlim3O70209 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pdlim3O70209 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pdlim3O70209 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pdlim3O70209 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
Pdlim3O70209 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pdlim3O70209 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pdlim3O70209 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pdlim3O70209 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Pdlim3O70209 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pdlim3O70209 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pdlim3O70209 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pdlim3O70209 AC163280.1-201ENSMUST00000228194 1100 ntBASIC15.27■□□□□ 0.04
Pdlim3O70209 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pdlim3O70209 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Pdlim3O70209 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC15.27■□□□□ 0.03
Pdlim3O70209 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Pdlim3O70209 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Pdlim3O70209 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC15.27■□□□□ 0.03
Pdlim3O70209 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Pdlim3O70209 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC15.27■□□□□ 0.03
Pdlim3O70209 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Pdlim3O70209 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
Pdlim3O70209 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC15.26■□□□□ 0.03
Pdlim3O70209 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pdlim3O70209 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Pdlim3O70209 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pdlim3O70209 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pdlim3O70209 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pdlim3O70209 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pdlim3O70209 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Pdlim3O70209 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pdlim3O70209 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pdlim3O70209 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pdlim3O70209 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC15.26■□□□□ 0.03
Pdlim3O70209 Gm4974-201ENSMUST00000209974 875 ntBASIC15.26■□□□□ 0.03
Pdlim3O70209 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pdlim3O70209 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Pdlim3O70209 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pdlim3O70209 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Pdlim3O70209 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pdlim3O70209 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pdlim3O70209 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pdlim3O70209 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Pdlim3O70209 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC15.26■□□□□ 0.03
Pdlim3O70209 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Pdlim3O70209 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Pdlim3O70209 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Pdlim3O70209 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC15.25■□□□□ 0.03
Pdlim3O70209 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pdlim3O70209 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC15.25■□□□□ 0.03
Pdlim3O70209 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pdlim3O70209 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pdlim3O70209 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pdlim3O70209 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Pdlim3O70209 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC15.25■□□□□ 0.03
Pdlim3O70209 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pdlim3O70209 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pdlim3O70209 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pdlim3O70209 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pdlim3O70209 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC15.25■□□□□ 0.03
Pdlim3O70209 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pdlim3O70209 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pdlim3O70209 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Pdlim3O70209 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pdlim3O70209 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pdlim3O70209 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pdlim3O70209 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Pdlim3O70209 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pdlim3O70209 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Pdlim3O70209 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Pdlim3O70209 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Pdlim3O70209 Gm21596-201ENSMUST00000178049 1316 ntBASIC15.24■□□□□ 0.03
Pdlim3O70209 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pdlim3O70209 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pdlim3O70209 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Pdlim3O70209 AL590614.2-201ENSMUST00000225374 1937 ntBASIC15.24■□□□□ 0.03
Pdlim3O70209 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pdlim3O70209 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pdlim3O70209 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Pdlim3O70209 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pdlim3O70209 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pdlim3O70209 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pdlim3O70209 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pdlim3O70209 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pdlim3O70209 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pdlim3O70209 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Pdlim3O70209 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pdlim3O70209 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms