Protein–RNA interactions for Protein: O55142

Rpl35a, 60S ribosomal protein L35a, mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl35aO55142 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC12.54□□□□□ -0.4
Rpl35aO55142 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
Rpl35aO55142 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rpl35aO55142 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rpl35aO55142 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Rpl35aO55142 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rpl35aO55142 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rpl35aO55142 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rpl35aO55142 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rpl35aO55142 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Rpl35aO55142 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC12.53□□□□□ -0.4
Rpl35aO55142 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Rpl35aO55142 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC12.53□□□□□ -0.4
Rpl35aO55142 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rpl35aO55142 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rpl35aO55142 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Rpl35aO55142 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rpl35aO55142 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
Rpl35aO55142 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Rpl35aO55142 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC12.53□□□□□ -0.4
Rpl35aO55142 Gm45058-201ENSMUST00000205810 766 ntBASIC12.53□□□□□ -0.4
Rpl35aO55142 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rpl35aO55142 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rpl35aO55142 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rpl35aO55142 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rpl35aO55142 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rpl35aO55142 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rpl35aO55142 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC12.53□□□□□ -0.4
Rpl35aO55142 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Rpl35aO55142 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rpl35aO55142 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Rpl35aO55142 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Rpl35aO55142 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rpl35aO55142 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Rpl35aO55142 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
Rpl35aO55142 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Rpl35aO55142 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Rpl35aO55142 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Rpl35aO55142 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Rpl35aO55142 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Rpl35aO55142 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Rpl35aO55142 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rpl35aO55142 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rpl35aO55142 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC12.52□□□□□ -0.41
Rpl35aO55142 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Rpl35aO55142 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC12.52□□□□□ -0.41
Rpl35aO55142 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC12.52□□□□□ -0.41
Rpl35aO55142 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Rpl35aO55142 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Rpl35aO55142 Il3ra-202ENSMUST00000223589 738 ntBASIC12.52□□□□□ -0.41
Rpl35aO55142 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rpl35aO55142 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rpl35aO55142 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rpl35aO55142 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Rpl35aO55142 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rpl35aO55142 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rpl35aO55142 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rpl35aO55142 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rpl35aO55142 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rpl35aO55142 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rpl35aO55142 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Rpl35aO55142 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC12.51□□□□□ -0.41
Rpl35aO55142 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rpl35aO55142 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rpl35aO55142 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rpl35aO55142 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rpl35aO55142 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Rpl35aO55142 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rpl35aO55142 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rpl35aO55142 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Rpl35aO55142 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rpl35aO55142 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rpl35aO55142 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC12.51□□□□□ -0.41
Rpl35aO55142 Gm16061-201ENSMUST00000122167 857 ntBASIC12.51□□□□□ -0.41
Rpl35aO55142 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC12.51□□□□□ -0.41
Rpl35aO55142 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Rpl35aO55142 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rpl35aO55142 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rpl35aO55142 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC12.51□□□□□ -0.41
Rpl35aO55142 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Rpl35aO55142 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rpl35aO55142 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rpl35aO55142 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rpl35aO55142 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC12.51□□□□□ -0.41
Rpl35aO55142 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Rpl35aO55142 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rpl35aO55142 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rpl35aO55142 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC12.5□□□□□ -0.41
Rpl35aO55142 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rpl35aO55142 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rpl35aO55142 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rpl35aO55142 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rpl35aO55142 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Rpl35aO55142 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC12.5□□□□□ -0.41
Rpl35aO55142 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC12.5□□□□□ -0.41
Rpl35aO55142 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC12.5□□□□□ -0.41
Rpl35aO55142 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rpl35aO55142 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Rpl35aO55142 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rpl35aO55142 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms