Protein–RNA interactions for Protein: O55055

Trdmt1, tRNA (cytosine(38)-C(5))-methyltransferase, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdmt1O55055 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Trdmt1O55055 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trdmt1O55055 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC18.48■□□□□ 0.55
Trdmt1O55055 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trdmt1O55055 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Trdmt1O55055 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Trdmt1O55055 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trdmt1O55055 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trdmt1O55055 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trdmt1O55055 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trdmt1O55055 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC18.47■□□□□ 0.55
Trdmt1O55055 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Trdmt1O55055 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trdmt1O55055 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Trdmt1O55055 Gm2651-201ENSMUST00000203560 838 ntBASIC18.47■□□□□ 0.55
Trdmt1O55055 Gm6376-201ENSMUST00000209407 580 ntBASIC18.47■□□□□ 0.55
Trdmt1O55055 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC18.47■□□□□ 0.55
Trdmt1O55055 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Trdmt1O55055 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trdmt1O55055 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trdmt1O55055 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trdmt1O55055 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trdmt1O55055 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trdmt1O55055 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trdmt1O55055 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trdmt1O55055 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trdmt1O55055 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trdmt1O55055 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Trdmt1O55055 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trdmt1O55055 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trdmt1O55055 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trdmt1O55055 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC18.46■□□□□ 0.55
Trdmt1O55055 Gm7862-201ENSMUST00000121461 292 ntBASIC18.46■□□□□ 0.55
Trdmt1O55055 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC18.46■□□□□ 0.55
Trdmt1O55055 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC18.46■□□□□ 0.55
Trdmt1O55055 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC18.46■□□□□ 0.55
Trdmt1O55055 Gm13830-205ENSMUST00000201195 1155 ntBASIC18.46■□□□□ 0.55
Trdmt1O55055 Gm5867-201ENSMUST00000063197 592 ntBASIC18.46■□□□□ 0.55
Trdmt1O55055 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trdmt1O55055 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trdmt1O55055 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trdmt1O55055 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trdmt1O55055 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trdmt1O55055 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Trdmt1O55055 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Trdmt1O55055 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Trdmt1O55055 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC18.45■□□□□ 0.54
Trdmt1O55055 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC18.45■□□□□ 0.54
Trdmt1O55055 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trdmt1O55055 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Trdmt1O55055 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trdmt1O55055 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trdmt1O55055 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trdmt1O55055 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Trdmt1O55055 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
Trdmt1O55055 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trdmt1O55055 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC18.45■□□□□ 0.54
Trdmt1O55055 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trdmt1O55055 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC18.45■□□□□ 0.54
Trdmt1O55055 Gm44357-201ENSMUST00000195897 142 ntBASIC18.45■□□□□ 0.54
Trdmt1O55055 Gm19658-201ENSMUST00000196231 138 ntBASIC18.45■□□□□ 0.54
Trdmt1O55055 Gm44367-201ENSMUST00000196836 138 ntBASIC18.45■□□□□ 0.54
Trdmt1O55055 Gm44350-201ENSMUST00000197197 138 ntBASIC18.45■□□□□ 0.54
Trdmt1O55055 Gm44390-201ENSMUST00000197533 144 ntBASIC18.45■□□□□ 0.54
Trdmt1O55055 Gm44313-201ENSMUST00000198018 138 ntBASIC18.45■□□□□ 0.54
Trdmt1O55055 Gm44486-201ENSMUST00000198508 138 ntBASIC18.45■□□□□ 0.54
Trdmt1O55055 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Trdmt1O55055 Gm44314-201ENSMUST00000199263 138 ntBASIC18.45■□□□□ 0.54
Trdmt1O55055 Gm44394-201ENSMUST00000199558 138 ntBASIC18.45■□□□□ 0.54
Trdmt1O55055 Gm44484-201ENSMUST00000199873 138 ntBASIC18.45■□□□□ 0.54
Trdmt1O55055 Gm44466-201ENSMUST00000200264 138 ntBASIC18.45■□□□□ 0.54
Trdmt1O55055 Gm44359-201ENSMUST00000200671 138 ntBASIC18.45■□□□□ 0.54
Trdmt1O55055 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Trdmt1O55055 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trdmt1O55055 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trdmt1O55055 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Trdmt1O55055 Dmtn-207ENSMUST00000228001 2437 ntBASIC18.45■□□□□ 0.54
Trdmt1O55055 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trdmt1O55055 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trdmt1O55055 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trdmt1O55055 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Trdmt1O55055 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trdmt1O55055 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC18.45■□□□□ 0.54
Trdmt1O55055 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trdmt1O55055 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Trdmt1O55055 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trdmt1O55055 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trdmt1O55055 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trdmt1O55055 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trdmt1O55055 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Trdmt1O55055 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trdmt1O55055 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Trdmt1O55055 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Trdmt1O55055 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC18.44■□□□□ 0.54
Trdmt1O55055 Gm27525-201ENSMUST00000184465 107 ntBASIC18.44■□□□□ 0.54
Trdmt1O55055 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC18.44■□□□□ 0.54
Trdmt1O55055 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC18.44■□□□□ 0.54
Trdmt1O55055 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trdmt1O55055 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC18.44■□□□□ 0.54
Trdmt1O55055 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms