Protein–RNA interactions for Protein: O54990

Prom1, Prominin-1, mousemouse

Predictions only

Length 867 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prom1O54990 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Prom1O54990 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC18.51■□□□□ 0.55
Prom1O54990 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
Prom1O54990 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Prom1O54990 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Prom1O54990 Gm43514-201ENSMUST00000198852 424 ntBASIC18.51■□□□□ 0.55
Prom1O54990 Gm6443-201ENSMUST00000203599 874 ntBASIC18.51■□□□□ 0.55
Prom1O54990 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Prom1O54990 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Prom1O54990 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC18.51■□□□□ 0.55
Prom1O54990 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC18.51■□□□□ 0.55
Prom1O54990 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
Prom1O54990 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Prom1O54990 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Prom1O54990 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC18.51■□□□□ 0.55
Prom1O54990 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Prom1O54990 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC18.5■□□□□ 0.55
Prom1O54990 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Prom1O54990 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC18.5■□□□□ 0.55
Prom1O54990 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC18.5■□□□□ 0.55
Prom1O54990 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC18.5■□□□□ 0.55
Prom1O54990 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC18.5■□□□□ 0.55
Prom1O54990 AC160338.1-201ENSMUST00000214232 705 ntBASIC18.5■□□□□ 0.55
Prom1O54990 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Prom1O54990 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Prom1O54990 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Prom1O54990 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC18.5■□□□□ 0.55
Prom1O54990 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Prom1O54990 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Prom1O54990 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Prom1O54990 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Prom1O54990 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Prom1O54990 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Prom1O54990 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC18.49■□□□□ 0.55
Prom1O54990 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Prom1O54990 Fcho2-208ENSMUST00000224992 2964 ntBASIC18.49■□□□□ 0.55
Prom1O54990 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Prom1O54990 Gm37519-201ENSMUST00000191687 2210 ntBASIC18.49■□□□□ 0.55
Prom1O54990 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Prom1O54990 Gm15372-201ENSMUST00000120729 834 ntBASIC18.49■□□□□ 0.55
Prom1O54990 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Prom1O54990 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Prom1O54990 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC18.49■□□□□ 0.55
Prom1O54990 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Prom1O54990 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC18.49■□□□□ 0.55
Prom1O54990 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Prom1O54990 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC18.49■□□□□ 0.55
Prom1O54990 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Prom1O54990 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Prom1O54990 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Prom1O54990 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
Prom1O54990 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Prom1O54990 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Prom1O54990 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
Prom1O54990 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Prom1O54990 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Prom1O54990 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC18.48■□□□□ 0.55
Prom1O54990 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Prom1O54990 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Prom1O54990 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Prom1O54990 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Prom1O54990 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Prom1O54990 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Prom1O54990 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Prom1O54990 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC18.47■□□□□ 0.55
Prom1O54990 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Prom1O54990 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Prom1O54990 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Prom1O54990 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Prom1O54990 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Prom1O54990 AC108846.1-201ENSMUST00000214531 513 ntBASIC18.47■□□□□ 0.55
Prom1O54990 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Prom1O54990 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC18.47■□□□□ 0.55
Prom1O54990 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Prom1O54990 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Prom1O54990 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Prom1O54990 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Prom1O54990 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Prom1O54990 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Prom1O54990 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Prom1O54990 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Prom1O54990 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Prom1O54990 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Prom1O54990 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Prom1O54990 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC18.46■□□□□ 0.55
Prom1O54990 Gm27525-201ENSMUST00000184465 107 ntBASIC18.46■□□□□ 0.55
Prom1O54990 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC18.46■□□□□ 0.55
Prom1O54990 Gm44357-201ENSMUST00000195897 142 ntBASIC18.46■□□□□ 0.55
Prom1O54990 Gm19658-201ENSMUST00000196231 138 ntBASIC18.46■□□□□ 0.55
Prom1O54990 Gm44367-201ENSMUST00000196836 138 ntBASIC18.46■□□□□ 0.55
Prom1O54990 Gm44350-201ENSMUST00000197197 138 ntBASIC18.46■□□□□ 0.55
Prom1O54990 Gm44390-201ENSMUST00000197533 144 ntBASIC18.46■□□□□ 0.55
Prom1O54990 Gm44313-201ENSMUST00000198018 138 ntBASIC18.46■□□□□ 0.55
Prom1O54990 Gm44486-201ENSMUST00000198508 138 ntBASIC18.46■□□□□ 0.55
Prom1O54990 Gm44454-201ENSMUST00000198541 138 ntBASIC18.46■□□□□ 0.55
Prom1O54990 Gm44314-201ENSMUST00000199263 138 ntBASIC18.46■□□□□ 0.55
Prom1O54990 Gm44394-201ENSMUST00000199558 138 ntBASIC18.46■□□□□ 0.55
Prom1O54990 Gm44484-201ENSMUST00000199873 138 ntBASIC18.46■□□□□ 0.55
Prom1O54990 Gm44466-201ENSMUST00000200264 138 ntBASIC18.46■□□□□ 0.55
Prom1O54990 Gm44359-201ENSMUST00000200671 138 ntBASIC18.46■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms