Protein–RNA interactions for Protein: O54962

Banf1, Barrier-to-autointegration factor, mousemouse

Predictions only

Length 89 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Banf1O54962 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Banf1O54962 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Banf1O54962 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Banf1O54962 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
Banf1O54962 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Banf1O54962 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC17.13■□□□□ 0.33
Banf1O54962 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Banf1O54962 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Banf1O54962 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Banf1O54962 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Banf1O54962 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Banf1O54962 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC17.12■□□□□ 0.33
Banf1O54962 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Banf1O54962 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC17.12■□□□□ 0.33
Banf1O54962 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
Banf1O54962 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Banf1O54962 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Banf1O54962 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Banf1O54962 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC17.12■□□□□ 0.33
Banf1O54962 Gm5643-201ENSMUST00000117081 966 ntBASIC17.12■□□□□ 0.33
Banf1O54962 AC135637.1-201ENSMUST00000227750 365 ntBASIC17.12■□□□□ 0.33
Banf1O54962 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC17.12■□□□□ 0.33
Banf1O54962 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Banf1O54962 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Banf1O54962 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Banf1O54962 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Banf1O54962 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC17.12■□□□□ 0.33
Banf1O54962 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Banf1O54962 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Banf1O54962 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Banf1O54962 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Banf1O54962 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Banf1O54962 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Banf1O54962 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Banf1O54962 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Banf1O54962 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Banf1O54962 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Banf1O54962 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
Banf1O54962 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC17.11■□□□□ 0.33
Banf1O54962 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Banf1O54962 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC17.11■□□□□ 0.33
Banf1O54962 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Banf1O54962 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Banf1O54962 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Banf1O54962 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Banf1O54962 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Banf1O54962 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Banf1O54962 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Banf1O54962 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Banf1O54962 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Banf1O54962 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Banf1O54962 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Banf1O54962 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
Banf1O54962 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Banf1O54962 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Banf1O54962 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Banf1O54962 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Banf1O54962 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Banf1O54962 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC17.1■□□□□ 0.33
Banf1O54962 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Banf1O54962 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Banf1O54962 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
Banf1O54962 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Banf1O54962 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Banf1O54962 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Banf1O54962 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Banf1O54962 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Banf1O54962 Gm12085-201ENSMUST00000119263 940 ntBASIC17.1■□□□□ 0.33
Banf1O54962 Gm17661-201ENSMUST00000170317 270 ntBASIC17.1■□□□□ 0.33
Banf1O54962 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Banf1O54962 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Banf1O54962 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
Banf1O54962 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Banf1O54962 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC17.1■□□□□ 0.33
Banf1O54962 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Banf1O54962 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Banf1O54962 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Banf1O54962 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Banf1O54962 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Banf1O54962 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Banf1O54962 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Banf1O54962 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Banf1O54962 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Banf1O54962 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Banf1O54962 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
Banf1O54962 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Banf1O54962 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Banf1O54962 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Banf1O54962 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC17.09■□□□□ 0.33
Banf1O54962 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Banf1O54962 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Banf1O54962 AC124581.1-201ENSMUST00000225416 1399 ntBASIC17.09■□□□□ 0.33
Banf1O54962 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Banf1O54962 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Banf1O54962 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Banf1O54962 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Banf1O54962 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Banf1O54962 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Banf1O54962 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Banf1O54962 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 65.2 ms