Protein–RNA interactions for Protein: O54943

Per2, Period circadian protein homolog 2, mousemouse

Predictions only

Length 1,257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Per2O54943 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC17.53■□□□□ 0.4
Per2O54943 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC17.53■□□□□ 0.4
Per2O54943 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC17.53■□□□□ 0.4
Per2O54943 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Per2O54943 Gm21814-202ENSMUST00000203277 873 ntBASIC17.53■□□□□ 0.4
Per2O54943 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Per2O54943 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Per2O54943 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Per2O54943 Gm8839-201ENSMUST00000121279 1645 ntBASIC17.53■□□□□ 0.4
Per2O54943 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Per2O54943 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Per2O54943 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Per2O54943 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Per2O54943 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Per2O54943 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Per2O54943 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Per2O54943 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Per2O54943 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Per2O54943 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Per2O54943 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Per2O54943 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Per2O54943 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Per2O54943 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC17.52■□□□□ 0.4
Per2O54943 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC17.52■□□□□ 0.4
Per2O54943 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Per2O54943 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Per2O54943 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
Per2O54943 Gm43548-201ENSMUST00000197139 2353 ntBASIC17.52■□□□□ 0.39
Per2O54943 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.39
Per2O54943 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Per2O54943 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Per2O54943 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Per2O54943 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Per2O54943 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Per2O54943 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Per2O54943 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Per2O54943 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC17.51■□□□□ 0.39
Per2O54943 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC17.51■□□□□ 0.39
Per2O54943 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC17.51■□□□□ 0.39
Per2O54943 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Per2O54943 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Per2O54943 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC17.51■□□□□ 0.39
Per2O54943 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Per2O54943 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Per2O54943 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
Per2O54943 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC17.51■□□□□ 0.39
Per2O54943 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Per2O54943 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Per2O54943 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Per2O54943 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Per2O54943 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Per2O54943 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Per2O54943 Gm27463-201ENSMUST00000183569 57 ntBASIC17.5■□□□□ 0.39
Per2O54943 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC17.5■□□□□ 0.39
Per2O54943 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC17.5■□□□□ 0.39
Per2O54943 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC17.5■□□□□ 0.39
Per2O54943 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Per2O54943 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Per2O54943 Haglr-201ENSMUST00000100000 2085 ntBASIC17.5■□□□□ 0.39
Per2O54943 Gm15743-202ENSMUST00000182690 1901 ntBASIC17.5■□□□□ 0.39
Per2O54943 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Per2O54943 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Per2O54943 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Per2O54943 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Per2O54943 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC17.5■□□□□ 0.39
Per2O54943 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Per2O54943 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Per2O54943 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Per2O54943 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Per2O54943 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC17.49■□□□□ 0.39
Per2O54943 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Per2O54943 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Per2O54943 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC17.49■□□□□ 0.39
Per2O54943 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Per2O54943 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Per2O54943 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Per2O54943 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC17.49■□□□□ 0.39
Per2O54943 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Per2O54943 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC17.49■□□□□ 0.39
Per2O54943 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Per2O54943 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Per2O54943 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Per2O54943 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Per2O54943 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Per2O54943 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Per2O54943 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Per2O54943 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Per2O54943 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Per2O54943 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Per2O54943 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Per2O54943 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Per2O54943 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Per2O54943 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Per2O54943 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Per2O54943 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Per2O54943 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC17.48■□□□□ 0.39
Per2O54943 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Per2O54943 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC17.48■□□□□ 0.39
Per2O54943 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Per2O54943 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms