Protein–RNA interactions for Protein: O54942

Cldn5, Claudin-5, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn5O54942 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cldn5O54942 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Cldn5O54942 Cxcl14-202ENSMUST00000224801 1467 ntBASIC17.47■□□□□ 0.39
Cldn5O54942 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cldn5O54942 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC17.47■□□□□ 0.39
Cldn5O54942 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cldn5O54942 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cldn5O54942 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Cldn5O54942 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cldn5O54942 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
Cldn5O54942 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC17.46■□□□□ 0.39
Cldn5O54942 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cldn5O54942 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cldn5O54942 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Cldn5O54942 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Cldn5O54942 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Cldn5O54942 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cldn5O54942 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Cldn5O54942 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cldn5O54942 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cldn5O54942 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Cldn5O54942 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cldn5O54942 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cldn5O54942 Gm45203-201ENSMUST00000206384 1831 ntBASIC17.46■□□□□ 0.39
Cldn5O54942 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cldn5O54942 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Cldn5O54942 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.38
Cldn5O54942 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cldn5O54942 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cldn5O54942 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cldn5O54942 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC17.45■□□□□ 0.38
Cldn5O54942 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cldn5O54942 Gm44450-201ENSMUST00000199528 114 ntBASIC17.45■□□□□ 0.38
Cldn5O54942 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC17.45■□□□□ 0.38
Cldn5O54942 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Cldn5O54942 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cldn5O54942 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC17.45■□□□□ 0.38
Cldn5O54942 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cldn5O54942 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Cldn5O54942 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Cldn5O54942 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cldn5O54942 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cldn5O54942 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC17.45■□□□□ 0.38
Cldn5O54942 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cldn5O54942 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cldn5O54942 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Cldn5O54942 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cldn5O54942 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Cldn5O54942 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cldn5O54942 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Cldn5O54942 Ank2-226ENSMUST00000189368 339 ntBASIC17.44■□□□□ 0.38
Cldn5O54942 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC17.44■□□□□ 0.38
Cldn5O54942 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cldn5O54942 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cldn5O54942 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Cldn5O54942 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cldn5O54942 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Cldn5O54942 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cldn5O54942 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Cldn5O54942 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cldn5O54942 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Cldn5O54942 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Cldn5O54942 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Cldn5O54942 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cldn5O54942 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cldn5O54942 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Cldn5O54942 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cldn5O54942 Gm6598-201ENSMUST00000202719 2615 ntBASIC17.43■□□□□ 0.38
Cldn5O54942 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cldn5O54942 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cldn5O54942 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cldn5O54942 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Cldn5O54942 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cldn5O54942 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cldn5O54942 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cldn5O54942 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cldn5O54942 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Cldn5O54942 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cldn5O54942 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Cldn5O54942 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cldn5O54942 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC17.43■□□□□ 0.38
Cldn5O54942 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cldn5O54942 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cldn5O54942 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cldn5O54942 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cldn5O54942 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cldn5O54942 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cldn5O54942 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cldn5O54942 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cldn5O54942 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
Cldn5O54942 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Cldn5O54942 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Cldn5O54942 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cldn5O54942 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Cldn5O54942 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Cldn5O54942 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cldn5O54942 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
Cldn5O54942 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cldn5O54942 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cldn5O54942 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms