Protein–RNA interactions for Protein: O54941

Smarce1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, mousemouse

Known RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarce1O54941 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Smarce1O54941 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Smarce1O54941 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Smarce1O54941 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC20■□□□□ 0.79
Smarce1O54941 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Smarce1O54941 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Smarce1O54941 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Smarce1O54941 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Smarce1O54941 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Smarce1O54941 Gm15378-201ENSMUST00000121894 207 ntBASIC20■□□□□ 0.79
Smarce1O54941 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC20■□□□□ 0.79
Smarce1O54941 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC20■□□□□ 0.79
Smarce1O54941 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC20■□□□□ 0.79
Smarce1O54941 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Smarce1O54941 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Smarce1O54941 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Smarce1O54941 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC20■□□□□ 0.79
Smarce1O54941 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Smarce1O54941 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Smarce1O54941 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Smarce1O54941 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Smarce1O54941 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Smarce1O54941 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC20■□□□□ 0.79
Smarce1O54941 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC20■□□□□ 0.79
Smarce1O54941 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Smarce1O54941 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC19.99■□□□□ 0.79
Smarce1O54941 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Smarce1O54941 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Smarce1O54941 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Smarce1O54941 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Smarce1O54941 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Smarce1O54941 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Smarce1O54941 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Smarce1O54941 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Smarce1O54941 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Smarce1O54941 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Smarce1O54941 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Smarce1O54941 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Smarce1O54941 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Smarce1O54941 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Smarce1O54941 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Smarce1O54941 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Smarce1O54941 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Smarce1O54941 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Smarce1O54941 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Smarce1O54941 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Smarce1O54941 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Smarce1O54941 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Smarce1O54941 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Smarce1O54941 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Smarce1O54941 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Smarce1O54941 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Smarce1O54941 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Smarce1O54941 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Smarce1O54941 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Smarce1O54941 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Smarce1O54941 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Smarce1O54941 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Smarce1O54941 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Smarce1O54941 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Smarce1O54941 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Smarce1O54941 Gm44878-201ENSMUST00000205812 1295 ntBASIC19.97■□□□□ 0.79
Smarce1O54941 Gm9731-201ENSMUST00000209480 747 ntBASIC19.97■□□□□ 0.79
Smarce1O54941 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Smarce1O54941 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Smarce1O54941 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Smarce1O54941 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
Smarce1O54941 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Smarce1O54941 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC19.97■□□□□ 0.79
Smarce1O54941 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC19.97■□□□□ 0.79
Smarce1O54941 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Smarce1O54941 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Smarce1O54941 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Smarce1O54941 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Smarce1O54941 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Smarce1O54941 Gm5643-201ENSMUST00000117081 966 ntBASIC19.96■□□□□ 0.79
Smarce1O54941 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Smarce1O54941 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Smarce1O54941 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Smarce1O54941 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Smarce1O54941 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Smarce1O54941 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Smarce1O54941 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Smarce1O54941 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Smarce1O54941 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Smarce1O54941 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Smarce1O54941 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Smarce1O54941 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC19.95■□□□□ 0.78
Smarce1O54941 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Smarce1O54941 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Smarce1O54941 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Smarce1O54941 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Smarce1O54941 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Smarce1O54941 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Smarce1O54941 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Smarce1O54941 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Smarce1O54941 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Smarce1O54941 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Smarce1O54941 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Smarce1O54941 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 50.9 ms