Protein–RNA interactions for Protein: O35704

Sptlc1, Serine palmitoyltransferase 1, mousemouse

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sptlc1O35704 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC18.38■□□□□ 0.53
Sptlc1O35704 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sptlc1O35704 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Sptlc1O35704 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Sptlc1O35704 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sptlc1O35704 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sptlc1O35704 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sptlc1O35704 Tfap2a-209ENSMUST00000225180 1828 ntBASIC18.37■□□□□ 0.53
Sptlc1O35704 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sptlc1O35704 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sptlc1O35704 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Sptlc1O35704 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sptlc1O35704 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC18.37■□□□□ 0.53
Sptlc1O35704 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC18.37■□□□□ 0.53
Sptlc1O35704 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC18.37■□□□□ 0.53
Sptlc1O35704 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC18.37■□□□□ 0.53
Sptlc1O35704 Gm37102-201ENSMUST00000195740 1105 ntBASIC18.37■□□□□ 0.53
Sptlc1O35704 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sptlc1O35704 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Sptlc1O35704 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC18.37■□□□□ 0.53
Sptlc1O35704 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sptlc1O35704 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Sptlc1O35704 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sptlc1O35704 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sptlc1O35704 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Sptlc1O35704 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sptlc1O35704 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Sptlc1O35704 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Sptlc1O35704 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sptlc1O35704 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sptlc1O35704 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC18.36■□□□□ 0.53
Sptlc1O35704 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
Sptlc1O35704 Gm29707-201ENSMUST00000196325 491 ntBASIC18.36■□□□□ 0.53
Sptlc1O35704 Gm18421-201ENSMUST00000204122 625 ntBASIC18.36■□□□□ 0.53
Sptlc1O35704 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sptlc1O35704 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC18.36■□□□□ 0.53
Sptlc1O35704 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sptlc1O35704 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sptlc1O35704 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sptlc1O35704 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sptlc1O35704 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sptlc1O35704 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sptlc1O35704 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sptlc1O35704 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Sptlc1O35704 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sptlc1O35704 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sptlc1O35704 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
Sptlc1O35704 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sptlc1O35704 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Sptlc1O35704 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC18.35■□□□□ 0.53
Sptlc1O35704 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sptlc1O35704 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Sptlc1O35704 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Sptlc1O35704 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Sptlc1O35704 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC18.34■□□□□ 0.53
Sptlc1O35704 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC18.34■□□□□ 0.53
Sptlc1O35704 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sptlc1O35704 Gm42939-201ENSMUST00000197514 2205 ntBASIC18.34■□□□□ 0.53
Sptlc1O35704 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sptlc1O35704 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sptlc1O35704 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sptlc1O35704 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sptlc1O35704 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sptlc1O35704 Gm27459-201ENSMUST00000184860 107 ntBASIC18.34■□□□□ 0.53
Sptlc1O35704 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Sptlc1O35704 Gm37083-201ENSMUST00000195784 711 ntTSL 2 BASIC18.34■□□□□ 0.53
Sptlc1O35704 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC18.34■□□□□ 0.53
Sptlc1O35704 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Sptlc1O35704 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sptlc1O35704 AC153889.1-201ENSMUST00000219257 330 ntBASIC18.34■□□□□ 0.53
Sptlc1O35704 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sptlc1O35704 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sptlc1O35704 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Sptlc1O35704 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Sptlc1O35704 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sptlc1O35704 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sptlc1O35704 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Sptlc1O35704 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC18.33■□□□□ 0.53
Sptlc1O35704 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Sptlc1O35704 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Sptlc1O35704 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Sptlc1O35704 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Sptlc1O35704 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Sptlc1O35704 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Sptlc1O35704 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC18.33■□□□□ 0.52
Sptlc1O35704 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Sptlc1O35704 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.52
Sptlc1O35704 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC18.33■□□□□ 0.52
Sptlc1O35704 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Sptlc1O35704 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Sptlc1O35704 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Sptlc1O35704 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Sptlc1O35704 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Sptlc1O35704 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sptlc1O35704 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Sptlc1O35704 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sptlc1O35704 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sptlc1O35704 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sptlc1O35704 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Sptlc1O35704 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 18 ms