Protein–RNA interactions for Protein: O35604

Npc1, Niemann-Pick C1 protein, mousemouse

Predictions only

Length 1,277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1O35604 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC16.42■□□□□ 0.22
Npc1O35604 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Npc1O35604 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Npc1O35604 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
Npc1O35604 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
Npc1O35604 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Npc1O35604 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Npc1O35604 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Npc1O35604 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Npc1O35604 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Npc1O35604 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC16.41■□□□□ 0.22
Npc1O35604 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Npc1O35604 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Npc1O35604 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Npc1O35604 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC16.41■□□□□ 0.22
Npc1O35604 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Npc1O35604 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Npc1O35604 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Npc1O35604 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Npc1O35604 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Npc1O35604 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Npc1O35604 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Npc1O35604 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Npc1O35604 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Npc1O35604 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Npc1O35604 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Npc1O35604 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Npc1O35604 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Npc1O35604 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Npc1O35604 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Npc1O35604 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Npc1O35604 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
Npc1O35604 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
Npc1O35604 Gm18958-201ENSMUST00000174258 762 ntBASIC16.4■□□□□ 0.22
Npc1O35604 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
Npc1O35604 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Npc1O35604 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Npc1O35604 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Npc1O35604 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Npc1O35604 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC16.4■□□□□ 0.22
Npc1O35604 Gm45774-201ENSMUST00000211992 2665 ntBASIC16.4■□□□□ 0.22
Npc1O35604 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Npc1O35604 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
Npc1O35604 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC16.39■□□□□ 0.22
Npc1O35604 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC16.39■□□□□ 0.22
Npc1O35604 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC16.39■□□□□ 0.21
Npc1O35604 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Npc1O35604 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Npc1O35604 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Npc1O35604 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Npc1O35604 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Npc1O35604 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Npc1O35604 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Npc1O35604 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Npc1O35604 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Npc1O35604 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Npc1O35604 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC16.39■□□□□ 0.21
Npc1O35604 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Npc1O35604 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC16.39■□□□□ 0.21
Npc1O35604 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Npc1O35604 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Npc1O35604 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Npc1O35604 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Npc1O35604 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Npc1O35604 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Npc1O35604 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Npc1O35604 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Npc1O35604 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Npc1O35604 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC16.38■□□□□ 0.21
Npc1O35604 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Npc1O35604 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Npc1O35604 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Npc1O35604 Gm7213-201ENSMUST00000215977 950 ntBASIC16.38■□□□□ 0.21
Npc1O35604 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC16.38■□□□□ 0.21
Npc1O35604 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC16.38■□□□□ 0.21
Npc1O35604 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Npc1O35604 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
Npc1O35604 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Npc1O35604 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Npc1O35604 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Npc1O35604 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Npc1O35604 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Npc1O35604 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Npc1O35604 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Npc1O35604 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Npc1O35604 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Npc1O35604 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC16.37■□□□□ 0.21
Npc1O35604 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Npc1O35604 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Npc1O35604 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Npc1O35604 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Npc1O35604 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC16.37■□□□□ 0.21
Npc1O35604 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC16.37■□□□□ 0.21
Npc1O35604 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Npc1O35604 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Npc1O35604 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Npc1O35604 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Npc1O35604 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Npc1O35604 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Npc1O35604 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC16.37■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms