Protein–RNA interactions for Protein: O35600

Abca4, Retinal-specific ATP-binding cassette transporter, mousemouse

Predictions only

Length 2,310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca4O35600 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Abca4O35600 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Abca4O35600 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Abca4O35600 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
Abca4O35600 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Abca4O35600 Gm15653-201ENSMUST00000119247 907 ntBASIC15.77■□□□□ 0.11
Abca4O35600 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Abca4O35600 Gm25857-201ENSMUST00000082788 129 ntBASIC15.77■□□□□ 0.11
Abca4O35600 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Abca4O35600 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Abca4O35600 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Abca4O35600 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Abca4O35600 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Abca4O35600 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Abca4O35600 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC15.76■□□□□ 0.11
Abca4O35600 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC15.76■□□□□ 0.11
Abca4O35600 Gm7222-201ENSMUST00000117512 906 ntBASIC15.76■□□□□ 0.11
Abca4O35600 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Abca4O35600 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Abca4O35600 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Abca4O35600 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Abca4O35600 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Abca4O35600 Wnt10b-204ENSMUST00000226655 1807 ntBASIC15.76■□□□□ 0.11
Abca4O35600 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Abca4O35600 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Abca4O35600 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Abca4O35600 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC15.76■□□□□ 0.11
Abca4O35600 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC15.76■□□□□ 0.11
Abca4O35600 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Abca4O35600 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC15.75■□□□□ 0.11
Abca4O35600 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC15.75■□□□□ 0.11
Abca4O35600 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC15.75■□□□□ 0.11
Abca4O35600 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC15.75■□□□□ 0.11
Abca4O35600 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC15.75■□□□□ 0.11
Abca4O35600 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Abca4O35600 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Abca4O35600 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Abca4O35600 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Abca4O35600 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Abca4O35600 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Abca4O35600 Gm37500-201ENSMUST00000192059 1443 ntBASIC15.75■□□□□ 0.11
Abca4O35600 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC15.74■□□□□ 0.11
Abca4O35600 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC15.74■□□□□ 0.11
Abca4O35600 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Abca4O35600 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Abca4O35600 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Abca4O35600 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC15.74■□□□□ 0.11
Abca4O35600 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Abca4O35600 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Abca4O35600 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
Abca4O35600 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Abca4O35600 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Abca4O35600 Gm5682-201ENSMUST00000173402 505 ntBASIC15.74■□□□□ 0.11
Abca4O35600 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Abca4O35600 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Abca4O35600 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Abca4O35600 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Abca4O35600 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Abca4O35600 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Abca4O35600 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Abca4O35600 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Abca4O35600 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Abca4O35600 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Abca4O35600 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
Abca4O35600 Gm34220-201ENSMUST00000223001 2709 ntBASIC15.73■□□□□ 0.11
Abca4O35600 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC15.73■□□□□ 0.11
Abca4O35600 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Abca4O35600 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC15.73■□□□□ 0.11
Abca4O35600 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC15.73■□□□□ 0.11
Abca4O35600 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Abca4O35600 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Abca4O35600 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Abca4O35600 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Abca4O35600 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Abca4O35600 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Abca4O35600 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC15.73■□□□□ 0.11
Abca4O35600 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Abca4O35600 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Abca4O35600 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Abca4O35600 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Abca4O35600 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Abca4O35600 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Abca4O35600 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Abca4O35600 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC15.73■□□□□ 0.11
Abca4O35600 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Abca4O35600 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Abca4O35600 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Abca4O35600 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Abca4O35600 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC15.72■□□□□ 0.11
Abca4O35600 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC15.72■□□□□ 0.11
Abca4O35600 Gm7653-201ENSMUST00000214567 508 ntBASIC15.72■□□□□ 0.11
Abca4O35600 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Abca4O35600 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Abca4O35600 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Abca4O35600 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Abca4O35600 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Abca4O35600 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Abca4O35600 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Abca4O35600 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Abca4O35600 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC15.72■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms