Protein–RNA interactions for Protein: O35188

Cx3cl1, Fractalkine, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cl1O35188 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Cx3cl1O35188 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC15.81■□□□□ 0.12
Cx3cl1O35188 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cx3cl1O35188 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cx3cl1O35188 AC121598.2-201ENSMUST00000228376 2325 ntBASIC15.81■□□□□ 0.12
Cx3cl1O35188 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cx3cl1O35188 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cx3cl1O35188 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cx3cl1O35188 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cx3cl1O35188 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cx3cl1O35188 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cx3cl1O35188 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cx3cl1O35188 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cx3cl1O35188 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cx3cl1O35188 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC15.8■□□□□ 0.12
Cx3cl1O35188 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC15.8■□□□□ 0.12
Cx3cl1O35188 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cx3cl1O35188 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Cx3cl1O35188 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cx3cl1O35188 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC15.8■□□□□ 0.12
Cx3cl1O35188 Gm18958-201ENSMUST00000174258 762 ntBASIC15.8■□□□□ 0.12
Cx3cl1O35188 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC15.8■□□□□ 0.12
Cx3cl1O35188 AC121577.1-201ENSMUST00000227302 707 ntBASIC15.8■□□□□ 0.12
Cx3cl1O35188 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cx3cl1O35188 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC15.8■□□□□ 0.12
Cx3cl1O35188 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cx3cl1O35188 Gm15635-204ENSMUST00000208024 2539 ntBASIC15.8■□□□□ 0.12
Cx3cl1O35188 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Cx3cl1O35188 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Cx3cl1O35188 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cx3cl1O35188 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cx3cl1O35188 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Cx3cl1O35188 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cx3cl1O35188 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cx3cl1O35188 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cx3cl1O35188 Gm43338-201ENSMUST00000198617 2223 ntBASIC15.79■□□□□ 0.12
Cx3cl1O35188 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC15.79■□□□□ 0.12
Cx3cl1O35188 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cx3cl1O35188 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cx3cl1O35188 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cx3cl1O35188 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC15.79■□□□□ 0.12
Cx3cl1O35188 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Cx3cl1O35188 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cx3cl1O35188 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC15.79■□□□□ 0.12
Cx3cl1O35188 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Cx3cl1O35188 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Cx3cl1O35188 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC15.79■□□□□ 0.12
Cx3cl1O35188 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC15.79■□□□□ 0.12
Cx3cl1O35188 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Cx3cl1O35188 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
Cx3cl1O35188 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Cx3cl1O35188 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC15.79■□□□□ 0.12
Cx3cl1O35188 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Cx3cl1O35188 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC15.78■□□□□ 0.12
Cx3cl1O35188 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cx3cl1O35188 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cx3cl1O35188 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cx3cl1O35188 Spsb2-203ENSMUST00000112473 1322 ntBASIC15.78■□□□□ 0.12
Cx3cl1O35188 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cx3cl1O35188 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Cx3cl1O35188 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC15.78■□□□□ 0.12
Cx3cl1O35188 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Cx3cl1O35188 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cx3cl1O35188 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cx3cl1O35188 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Cx3cl1O35188 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cx3cl1O35188 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Cx3cl1O35188 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cx3cl1O35188 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC15.78■□□□□ 0.12
Cx3cl1O35188 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cx3cl1O35188 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Cx3cl1O35188 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Cx3cl1O35188 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Cx3cl1O35188 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Cx3cl1O35188 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Cx3cl1O35188 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Cx3cl1O35188 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Cx3cl1O35188 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Cx3cl1O35188 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
Cx3cl1O35188 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Cx3cl1O35188 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Cx3cl1O35188 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Cx3cl1O35188 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Cx3cl1O35188 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Cx3cl1O35188 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Cx3cl1O35188 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC15.77■□□□□ 0.11
Cx3cl1O35188 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Cx3cl1O35188 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
Cx3cl1O35188 Tfap2a-209ENSMUST00000225180 1828 ntBASIC15.77■□□□□ 0.11
Cx3cl1O35188 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Cx3cl1O35188 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
Cx3cl1O35188 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Cx3cl1O35188 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cx3cl1O35188 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cx3cl1O35188 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cx3cl1O35188 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Cx3cl1O35188 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cx3cl1O35188 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cx3cl1O35188 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cx3cl1O35188 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms