Protein–RNA interactions for Protein: O35118

Gfra3, GDNF family receptor alpha-3, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gfra3O35118 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC14.54□□□□□ -0.08
Gfra3O35118 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Gfra3O35118 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Gfra3O35118 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Gfra3O35118 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Gfra3O35118 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Gfra3O35118 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Gfra3O35118 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
Gfra3O35118 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
Gfra3O35118 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Gfra3O35118 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Gfra3O35118 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Gfra3O35118 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Gfra3O35118 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Gfra3O35118 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Gfra3O35118 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Gfra3O35118 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Gfra3O35118 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Gfra3O35118 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Gfra3O35118 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
Gfra3O35118 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Gfra3O35118 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Gfra3O35118 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Gfra3O35118 Gm8258-201ENSMUST00000055593 1449 ntBASIC14.53□□□□□ -0.08
Gfra3O35118 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Gfra3O35118 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Gfra3O35118 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Gfra3O35118 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Gfra3O35118 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Gfra3O35118 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Gfra3O35118 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Gfra3O35118 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Gfra3O35118 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Gfra3O35118 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Gfra3O35118 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Gfra3O35118 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Gfra3O35118 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
Gfra3O35118 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Gfra3O35118 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Gfra3O35118 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Gfra3O35118 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Gfra3O35118 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC14.53□□□□□ -0.08
Gfra3O35118 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Gfra3O35118 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Gfra3O35118 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Gfra3O35118 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Gfra3O35118 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC14.52□□□□□ -0.08
Gfra3O35118 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Gfra3O35118 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Gfra3O35118 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Gfra3O35118 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Gfra3O35118 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Gfra3O35118 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
Gfra3O35118 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Gfra3O35118 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Gfra3O35118 Gm11355-201ENSMUST00000121120 306 ntBASIC14.52□□□□□ -0.09
Gfra3O35118 Gm25016-201ENSMUST00000158399 131 ntBASIC14.52□□□□□ -0.09
Gfra3O35118 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC14.52□□□□□ -0.09
Gfra3O35118 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Gfra3O35118 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC14.52□□□□□ -0.09
Gfra3O35118 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Gfra3O35118 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Gfra3O35118 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Gfra3O35118 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Gfra3O35118 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC14.52□□□□□ -0.09
Gfra3O35118 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Gfra3O35118 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Gfra3O35118 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC14.51□□□□□ -0.09
Gfra3O35118 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Gfra3O35118 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Gfra3O35118 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Gfra3O35118 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Gfra3O35118 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Gfra3O35118 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Gfra3O35118 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Gfra3O35118 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC14.51□□□□□ -0.09
Gfra3O35118 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Gfra3O35118 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Gfra3O35118 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC14.51□□□□□ -0.09
Gfra3O35118 Gm9013-201ENSMUST00000132939 882 ntBASIC14.51□□□□□ -0.09
Gfra3O35118 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Gfra3O35118 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC14.51□□□□□ -0.09
Gfra3O35118 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Gfra3O35118 Gm18558-201ENSMUST00000186253 1214 ntBASIC14.51□□□□□ -0.09
Gfra3O35118 Gm5587-201ENSMUST00000206270 674 ntBASIC14.51□□□□□ -0.09
Gfra3O35118 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Gfra3O35118 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Gfra3O35118 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Gfra3O35118 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Gfra3O35118 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC14.51□□□□□ -0.09
Gfra3O35118 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Gfra3O35118 Gm16499-203ENSMUST00000204633 2177 ntBASIC14.51□□□□□ -0.09
Gfra3O35118 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Gfra3O35118 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Gfra3O35118 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Gfra3O35118 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Gfra3O35118 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Gfra3O35118 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Gfra3O35118 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Gfra3O35118 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 77.9 ms