Protein–RNA interactions for Protein: O08811

Ercc2, General transcription and DNA repair factor IIH helicase subunit XPD, mousemouse

Known RBP Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc2O08811 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ercc2O08811 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ercc2O08811 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ercc2O08811 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ercc2O08811 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Ercc2O08811 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Ercc2O08811 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ercc2O08811 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Ercc2O08811 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Ercc2O08811 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Ercc2O08811 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC17.21■□□□□ 0.35
Ercc2O08811 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC17.21■□□□□ 0.35
Ercc2O08811 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ercc2O08811 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Ercc2O08811 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ercc2O08811 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ercc2O08811 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.34
Ercc2O08811 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
Ercc2O08811 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Ercc2O08811 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ercc2O08811 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
Ercc2O08811 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ercc2O08811 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ercc2O08811 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Ercc2O08811 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Ercc2O08811 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ercc2O08811 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ercc2O08811 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ercc2O08811 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Ercc2O08811 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Ercc2O08811 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Ercc2O08811 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC17.2■□□□□ 0.34
Ercc2O08811 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Ercc2O08811 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ercc2O08811 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ercc2O08811 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
Ercc2O08811 Gm7213-201ENSMUST00000215977 950 ntBASIC17.2■□□□□ 0.34
Ercc2O08811 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ercc2O08811 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ercc2O08811 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ercc2O08811 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ercc2O08811 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ercc2O08811 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ercc2O08811 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ercc2O08811 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Ercc2O08811 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Ercc2O08811 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ercc2O08811 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ercc2O08811 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Ercc2O08811 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Ercc2O08811 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ercc2O08811 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC17.19■□□□□ 0.34
Ercc2O08811 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ercc2O08811 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
Ercc2O08811 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ercc2O08811 Gm9987-201ENSMUST00000069768 567 ntBASIC17.19■□□□□ 0.34
Ercc2O08811 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ercc2O08811 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ercc2O08811 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC17.19■□□□□ 0.34
Ercc2O08811 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ercc2O08811 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ercc2O08811 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ercc2O08811 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ercc2O08811 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ercc2O08811 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Ercc2O08811 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Ercc2O08811 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ercc2O08811 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ercc2O08811 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ercc2O08811 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Ercc2O08811 Actl10-202ENSMUST00000226583 1501 ntBASIC17.18■□□□□ 0.34
Ercc2O08811 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ercc2O08811 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ercc2O08811 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Ercc2O08811 Gm3272-201ENSMUST00000181181 1229 ntBASIC17.18■□□□□ 0.34
Ercc2O08811 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Ercc2O08811 Gm10566-201ENSMUST00000086739 996 ntBASIC17.18■□□□□ 0.34
Ercc2O08811 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ercc2O08811 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC17.18■□□□□ 0.34
Ercc2O08811 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ercc2O08811 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Ercc2O08811 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ercc2O08811 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ercc2O08811 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Ercc2O08811 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ercc2O08811 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Ercc2O08811 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Ercc2O08811 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ercc2O08811 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ercc2O08811 Gm45203-201ENSMUST00000206384 1831 ntBASIC17.17■□□□□ 0.34
Ercc2O08811 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ercc2O08811 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ercc2O08811 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ercc2O08811 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ercc2O08811 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Ercc2O08811 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC17.17■□□□□ 0.34
Ercc2O08811 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Ercc2O08811 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ercc2O08811 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ercc2O08811 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms