Protein–RNA interactions for Protein: O08788

Dctn1, Dynactin subunit 1, mousemouse

Predictions only

Length 1,281 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dctn1O08788 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Dctn1O08788 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Dctn1O08788 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Dctn1O08788 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC20.71■□□□□ 0.91
Dctn1O08788 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Dctn1O08788 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Dctn1O08788 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Dctn1O08788 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Dctn1O08788 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Dctn1O08788 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Dctn1O08788 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC20.71■□□□□ 0.91
Dctn1O08788 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC20.71■□□□□ 0.91
Dctn1O08788 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Dctn1O08788 AC153794.1-201ENSMUST00000169148 126 ntBASIC20.71■□□□□ 0.91
Dctn1O08788 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Dctn1O08788 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC20.71■□□□□ 0.91
Dctn1O08788 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Dctn1O08788 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Dctn1O08788 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Dctn1O08788 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Dctn1O08788 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC20.71■□□□□ 0.91
Dctn1O08788 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Dctn1O08788 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Dctn1O08788 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Dctn1O08788 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.91
Dctn1O08788 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Dctn1O08788 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC20.7■□□□□ 0.9
Dctn1O08788 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Dctn1O08788 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Dctn1O08788 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Dctn1O08788 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Dctn1O08788 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC20.7■□□□□ 0.9
Dctn1O08788 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Dctn1O08788 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC20.7■□□□□ 0.9
Dctn1O08788 Fam105a-203ENSMUST00000226170 3043 ntBASIC20.7■□□□□ 0.9
Dctn1O08788 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Dctn1O08788 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Dctn1O08788 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Dctn1O08788 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC20.7■□□□□ 0.9
Dctn1O08788 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC20.7■□□□□ 0.9
Dctn1O08788 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Dctn1O08788 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Dctn1O08788 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC20.69■□□□□ 0.9
Dctn1O08788 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
Dctn1O08788 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Dctn1O08788 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Dctn1O08788 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC20.69■□□□□ 0.9
Dctn1O08788 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Dctn1O08788 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Dctn1O08788 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Dctn1O08788 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Dctn1O08788 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Dctn1O08788 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Dctn1O08788 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Dctn1O08788 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Dctn1O08788 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Dctn1O08788 Gm12644-201ENSMUST00000119935 606 ntBASIC20.68■□□□□ 0.9
Dctn1O08788 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Dctn1O08788 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Dctn1O08788 AC108846.1-201ENSMUST00000214531 513 ntBASIC20.68■□□□□ 0.9
Dctn1O08788 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Dctn1O08788 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Dctn1O08788 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Dctn1O08788 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Dctn1O08788 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Dctn1O08788 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Dctn1O08788 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Dctn1O08788 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC20.67■□□□□ 0.9
Dctn1O08788 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Dctn1O08788 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Dctn1O08788 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Dctn1O08788 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Dctn1O08788 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Dctn1O08788 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Dctn1O08788 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Dctn1O08788 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC20.66■□□□□ 0.9
Dctn1O08788 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Dctn1O08788 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC20.66■□□□□ 0.9
Dctn1O08788 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC20.66■□□□□ 0.9
Dctn1O08788 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Dctn1O08788 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC20.66■□□□□ 0.9
Dctn1O08788 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Dctn1O08788 Zfp264-201ENSMUST00000208656 1563 ntBASIC20.66■□□□□ 0.9
Dctn1O08788 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Dctn1O08788 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Dctn1O08788 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Dctn1O08788 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Dctn1O08788 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Dctn1O08788 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC20.66■□□□□ 0.9
Dctn1O08788 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Dctn1O08788 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Dctn1O08788 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Dctn1O08788 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Dctn1O08788 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Dctn1O08788 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC20.65■□□□□ 0.9
Dctn1O08788 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Dctn1O08788 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Dctn1O08788 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Dctn1O08788 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Dctn1O08788 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC20.65■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms