Protein–RNA interactions for Protein: O08784

Tcof1, Treacle protein, mousemouse

Known RBP Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tcof1O08784 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Tcof1O08784 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Tcof1O08784 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Tcof1O08784 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Tcof1O08784 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Tcof1O08784 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
Tcof1O08784 Gm11860-201ENSMUST00000122346 1010 ntBASIC19.67■□□□□ 0.74
Tcof1O08784 Gm9013-201ENSMUST00000132939 882 ntBASIC19.67■□□□□ 0.74
Tcof1O08784 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC19.67■□□□□ 0.74
Tcof1O08784 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Tcof1O08784 AC154471.1-201ENSMUST00000224418 436 ntBASIC19.67■□□□□ 0.74
Tcof1O08784 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Tcof1O08784 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Tcof1O08784 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Tcof1O08784 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC19.67■□□□□ 0.74
Tcof1O08784 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Tcof1O08784 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Tcof1O08784 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Tcof1O08784 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Tcof1O08784 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Tcof1O08784 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Tcof1O08784 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Tcof1O08784 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Tcof1O08784 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Tcof1O08784 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Tcof1O08784 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Tcof1O08784 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC19.66■□□□□ 0.74
Tcof1O08784 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Tcof1O08784 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC19.66■□□□□ 0.74
Tcof1O08784 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Tcof1O08784 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Tcof1O08784 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Tcof1O08784 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Tcof1O08784 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Tcof1O08784 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC19.66■□□□□ 0.74
Tcof1O08784 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Tcof1O08784 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Tcof1O08784 Gm15743-202ENSMUST00000182690 1901 ntBASIC19.66■□□□□ 0.74
Tcof1O08784 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Tcof1O08784 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Tcof1O08784 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC19.65■□□□□ 0.74
Tcof1O08784 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Tcof1O08784 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Tcof1O08784 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Tcof1O08784 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Tcof1O08784 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Tcof1O08784 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Tcof1O08784 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Tcof1O08784 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Tcof1O08784 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Tcof1O08784 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Tcof1O08784 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.74
Tcof1O08784 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Tcof1O08784 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Tcof1O08784 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Tcof1O08784 Gm14859-201ENSMUST00000117752 357 ntBASIC19.64■□□□□ 0.73
Tcof1O08784 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Tcof1O08784 Gm25016-201ENSMUST00000158399 131 ntBASIC19.64■□□□□ 0.73
Tcof1O08784 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Tcof1O08784 Ank2-226ENSMUST00000189368 339 ntBASIC19.64■□□□□ 0.73
Tcof1O08784 Gm29518-201ENSMUST00000190858 372 ntBASIC19.64■□□□□ 0.73
Tcof1O08784 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC19.64■□□□□ 0.73
Tcof1O08784 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Tcof1O08784 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Tcof1O08784 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
Tcof1O08784 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Tcof1O08784 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Tcof1O08784 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Tcof1O08784 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Tcof1O08784 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Tcof1O08784 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Tcof1O08784 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Tcof1O08784 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC19.64■□□□□ 0.73
Tcof1O08784 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Tcof1O08784 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Tcof1O08784 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Tcof1O08784 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Tcof1O08784 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Tcof1O08784 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Tcof1O08784 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Tcof1O08784 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Tcof1O08784 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Tcof1O08784 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Tcof1O08784 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Tcof1O08784 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Tcof1O08784 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Tcof1O08784 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Tcof1O08784 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Tcof1O08784 Ddx41-204ENSMUST00000224765 2199 ntBASIC19.62■□□□□ 0.73
Tcof1O08784 Haglr-201ENSMUST00000100000 2085 ntBASIC19.62■□□□□ 0.73
Tcof1O08784 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Tcof1O08784 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC19.62■□□□□ 0.73
Tcof1O08784 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Tcof1O08784 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Tcof1O08784 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Tcof1O08784 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC19.62■□□□□ 0.73
Tcof1O08784 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Tcof1O08784 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Tcof1O08784 Gm9103-201ENSMUST00000119371 405 ntBASIC19.62■□□□□ 0.73
Tcof1O08784 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC19.62■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms