Protein–RNA interactions for Protein: E9Q6B2

Ccdc85c, Coiled-coil domain-containing protein 85C, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc85cE9Q6B2 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ccdc85cE9Q6B2 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ccdc85cE9Q6B2 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ccdc85cE9Q6B2 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC20.71■□□□□ 0.91
Ccdc85cE9Q6B2 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ccdc85cE9Q6B2 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Ccdc85cE9Q6B2 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ccdc85cE9Q6B2 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Ccdc85cE9Q6B2 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ccdc85cE9Q6B2 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Ccdc85cE9Q6B2 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
Ccdc85cE9Q6B2 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ccdc85cE9Q6B2 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Ccdc85cE9Q6B2 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Ccdc85cE9Q6B2 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ccdc85cE9Q6B2 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ccdc85cE9Q6B2 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Ccdc85cE9Q6B2 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ccdc85cE9Q6B2 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.91
Ccdc85cE9Q6B2 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC20.7■□□□□ 0.91
Ccdc85cE9Q6B2 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
Ccdc85cE9Q6B2 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Ccdc85cE9Q6B2 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC20.7■□□□□ 0.9
Ccdc85cE9Q6B2 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ccdc85cE9Q6B2 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ccdc85cE9Q6B2 Fst-202ENSMUST00000223640 2612 ntBASIC20.7■□□□□ 0.9
Ccdc85cE9Q6B2 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ccdc85cE9Q6B2 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Ccdc85cE9Q6B2 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ccdc85cE9Q6B2 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC20.7■□□□□ 0.9
Ccdc85cE9Q6B2 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ccdc85cE9Q6B2 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC20.7■□□□□ 0.9
Ccdc85cE9Q6B2 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC20.7■□□□□ 0.9
Ccdc85cE9Q6B2 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ccdc85cE9Q6B2 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ccdc85cE9Q6B2 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Ccdc85cE9Q6B2 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ccdc85cE9Q6B2 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ccdc85cE9Q6B2 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Ccdc85cE9Q6B2 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Ccdc85cE9Q6B2 Gm13616-201ENSMUST00000120600 222 ntBASIC20.69■□□□□ 0.9
Ccdc85cE9Q6B2 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC20.69■□□□□ 0.9
Ccdc85cE9Q6B2 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Ccdc85cE9Q6B2 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ccdc85cE9Q6B2 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Ccdc85cE9Q6B2 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ccdc85cE9Q6B2 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC20.69■□□□□ 0.9
Ccdc85cE9Q6B2 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC20.69■□□□□ 0.9
Ccdc85cE9Q6B2 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ccdc85cE9Q6B2 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ccdc85cE9Q6B2 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ccdc85cE9Q6B2 Zfp264-201ENSMUST00000208656 1563 ntBASIC20.68■□□□□ 0.9
Ccdc85cE9Q6B2 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Ccdc85cE9Q6B2 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ccdc85cE9Q6B2 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Ccdc85cE9Q6B2 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Ccdc85cE9Q6B2 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
Ccdc85cE9Q6B2 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Ccdc85cE9Q6B2 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ccdc85cE9Q6B2 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ccdc85cE9Q6B2 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC20.68■□□□□ 0.9
Ccdc85cE9Q6B2 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ccdc85cE9Q6B2 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ccdc85cE9Q6B2 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Ccdc85cE9Q6B2 Gm3928-201ENSMUST00000121141 1307 ntBASIC20.68■□□□□ 0.9
Ccdc85cE9Q6B2 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ccdc85cE9Q6B2 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ccdc85cE9Q6B2 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ccdc85cE9Q6B2 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ccdc85cE9Q6B2 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ccdc85cE9Q6B2 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ccdc85cE9Q6B2 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC20.67■□□□□ 0.9
Ccdc85cE9Q6B2 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ccdc85cE9Q6B2 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ccdc85cE9Q6B2 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC20.67■□□□□ 0.9
Ccdc85cE9Q6B2 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC20.67■□□□□ 0.9
Ccdc85cE9Q6B2 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ccdc85cE9Q6B2 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC20.67■□□□□ 0.9
Ccdc85cE9Q6B2 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ccdc85cE9Q6B2 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ccdc85cE9Q6B2 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ccdc85cE9Q6B2 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Ccdc85cE9Q6B2 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ccdc85cE9Q6B2 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Ccdc85cE9Q6B2 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Ccdc85cE9Q6B2 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ccdc85cE9Q6B2 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC20.67■□□□□ 0.9
Ccdc85cE9Q6B2 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Ccdc85cE9Q6B2 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Ccdc85cE9Q6B2 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ccdc85cE9Q6B2 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC20.66■□□□□ 0.9
Ccdc85cE9Q6B2 Gm4459-201ENSMUST00000118750 468 ntBASIC20.66■□□□□ 0.9
Ccdc85cE9Q6B2 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Ccdc85cE9Q6B2 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ccdc85cE9Q6B2 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ccdc85cE9Q6B2 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ccdc85cE9Q6B2 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ccdc85cE9Q6B2 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ccdc85cE9Q6B2 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ccdc85cE9Q6B2 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms