Protein–RNA interactions for Protein: E9Q5G2

Pcdhb9, Protocadherin beta 9, mousemouse

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb9E9Q5G2 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdhb9E9Q5G2 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Pcdhb9E9Q5G2 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC19.79■□□□□ 0.76
Pcdhb9E9Q5G2 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC19.79■□□□□ 0.76
Pcdhb9E9Q5G2 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
Pcdhb9E9Q5G2 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdhb9E9Q5G2 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdhb9E9Q5G2 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Pcdhb9E9Q5G2 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdhb9E9Q5G2 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC19.79■□□□□ 0.76
Pcdhb9E9Q5G2 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdhb9E9Q5G2 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdhb9E9Q5G2 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
Pcdhb9E9Q5G2 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdhb9E9Q5G2 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdhb9E9Q5G2 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdhb9E9Q5G2 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdhb9E9Q5G2 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
Pcdhb9E9Q5G2 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdhb9E9Q5G2 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Pcdhb9E9Q5G2 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdhb9E9Q5G2 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdhb9E9Q5G2 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Pcdhb9E9Q5G2 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC19.78■□□□□ 0.76
Pcdhb9E9Q5G2 Gm11950-201ENSMUST00000121615 838 ntBASIC19.78■□□□□ 0.76
Pcdhb9E9Q5G2 Gm6623-201ENSMUST00000173570 544 ntBASIC19.78■□□□□ 0.76
Pcdhb9E9Q5G2 Gm29707-201ENSMUST00000196325 491 ntBASIC19.78■□□□□ 0.76
Pcdhb9E9Q5G2 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdhb9E9Q5G2 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdhb9E9Q5G2 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC19.78■□□□□ 0.76
Pcdhb9E9Q5G2 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdhb9E9Q5G2 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdhb9E9Q5G2 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdhb9E9Q5G2 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pcdhb9E9Q5G2 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pcdhb9E9Q5G2 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Pcdhb9E9Q5G2 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pcdhb9E9Q5G2 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pcdhb9E9Q5G2 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pcdhb9E9Q5G2 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Pcdhb9E9Q5G2 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC19.77■□□□□ 0.76
Pcdhb9E9Q5G2 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC19.77■□□□□ 0.76
Pcdhb9E9Q5G2 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Pcdhb9E9Q5G2 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pcdhb9E9Q5G2 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
Pcdhb9E9Q5G2 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
Pcdhb9E9Q5G2 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdhb9E9Q5G2 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdhb9E9Q5G2 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdhb9E9Q5G2 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC19.76■□□□□ 0.75
Pcdhb9E9Q5G2 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC19.76■□□□□ 0.75
Pcdhb9E9Q5G2 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdhb9E9Q5G2 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdhb9E9Q5G2 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC19.76■□□□□ 0.75
Pcdhb9E9Q5G2 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC19.76■□□□□ 0.75
Pcdhb9E9Q5G2 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdhb9E9Q5G2 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdhb9E9Q5G2 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdhb9E9Q5G2 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdhb9E9Q5G2 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdhb9E9Q5G2 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC19.76■□□□□ 0.75
Pcdhb9E9Q5G2 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Pcdhb9E9Q5G2 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdhb9E9Q5G2 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdhb9E9Q5G2 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC19.75■□□□□ 0.75
Pcdhb9E9Q5G2 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdhb9E9Q5G2 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdhb9E9Q5G2 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdhb9E9Q5G2 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdhb9E9Q5G2 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC19.75■□□□□ 0.75
Pcdhb9E9Q5G2 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdhb9E9Q5G2 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC19.75■□□□□ 0.75
Pcdhb9E9Q5G2 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdhb9E9Q5G2 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC19.75■□□□□ 0.75
Pcdhb9E9Q5G2 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdhb9E9Q5G2 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdhb9E9Q5G2 AC121598.2-201ENSMUST00000228376 2325 ntBASIC19.75■□□□□ 0.75
Pcdhb9E9Q5G2 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdhb9E9Q5G2 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdhb9E9Q5G2 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdhb9E9Q5G2 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Pcdhb9E9Q5G2 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdhb9E9Q5G2 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdhb9E9Q5G2 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdhb9E9Q5G2 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdhb9E9Q5G2 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdhb9E9Q5G2 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdhb9E9Q5G2 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC19.74■□□□□ 0.75
Pcdhb9E9Q5G2 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC19.74■□□□□ 0.75
Pcdhb9E9Q5G2 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC19.74■□□□□ 0.75
Pcdhb9E9Q5G2 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdhb9E9Q5G2 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdhb9E9Q5G2 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Pcdhb9E9Q5G2 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Pcdhb9E9Q5G2 Zkscan4-202ENSMUST00000225845 1506 ntBASIC19.74■□□□□ 0.75
Pcdhb9E9Q5G2 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdhb9E9Q5G2 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdhb9E9Q5G2 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdhb9E9Q5G2 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Pcdhb9E9Q5G2 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms