Protein–RNA interactions for Protein: E9PY62

Cntnap3, Contactin-associated protein-like 3, mousemouse

Predictions only

Length 1,287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntnap3E9PY62 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cntnap3E9PY62 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cntnap3E9PY62 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Cntnap3E9PY62 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC18.47■□□□□ 0.55
Cntnap3E9PY62 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cntnap3E9PY62 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Cntnap3E9PY62 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC18.46■□□□□ 0.55
Cntnap3E9PY62 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cntnap3E9PY62 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cntnap3E9PY62 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cntnap3E9PY62 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Cntnap3E9PY62 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cntnap3E9PY62 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cntnap3E9PY62 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC18.46■□□□□ 0.55
Cntnap3E9PY62 Gm13036-201ENSMUST00000117799 748 ntBASIC18.46■□□□□ 0.55
Cntnap3E9PY62 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cntnap3E9PY62 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Cntnap3E9PY62 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
Cntnap3E9PY62 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC18.46■□□□□ 0.55
Cntnap3E9PY62 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cntnap3E9PY62 Gm42922-201ENSMUST00000195887 2078 ntBASIC18.46■□□□□ 0.55
Cntnap3E9PY62 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC18.45■□□□□ 0.54
Cntnap3E9PY62 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Cntnap3E9PY62 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cntnap3E9PY62 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC18.45■□□□□ 0.54
Cntnap3E9PY62 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Cntnap3E9PY62 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cntnap3E9PY62 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cntnap3E9PY62 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Cntnap3E9PY62 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Cntnap3E9PY62 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cntnap3E9PY62 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC18.45■□□□□ 0.54
Cntnap3E9PY62 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC18.45■□□□□ 0.54
Cntnap3E9PY62 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cntnap3E9PY62 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cntnap3E9PY62 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cntnap3E9PY62 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cntnap3E9PY62 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cntnap3E9PY62 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cntnap3E9PY62 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
Cntnap3E9PY62 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cntnap3E9PY62 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Cntnap3E9PY62 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC18.44■□□□□ 0.54
Cntnap3E9PY62 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
Cntnap3E9PY62 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cntnap3E9PY62 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Cntnap3E9PY62 Mir3113-201ENSMUST00000175478 76 ntBASIC18.44■□□□□ 0.54
Cntnap3E9PY62 Gm4535-201ENSMUST00000182274 558 ntBASIC18.44■□□□□ 0.54
Cntnap3E9PY62 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cntnap3E9PY62 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cntnap3E9PY62 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cntnap3E9PY62 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cntnap3E9PY62 Gm10355-201ENSMUST00000097146 517 ntBASIC18.44■□□□□ 0.54
Cntnap3E9PY62 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cntnap3E9PY62 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cntnap3E9PY62 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cntnap3E9PY62 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Cntnap3E9PY62 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Cntnap3E9PY62 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC18.44■□□□□ 0.54
Cntnap3E9PY62 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC18.44■□□□□ 0.54
Cntnap3E9PY62 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cntnap3E9PY62 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Cntnap3E9PY62 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Cntnap3E9PY62 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cntnap3E9PY62 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cntnap3E9PY62 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Cntnap3E9PY62 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cntnap3E9PY62 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Cntnap3E9PY62 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC18.43■□□□□ 0.54
Cntnap3E9PY62 Gm6550-201ENSMUST00000187574 993 ntBASIC18.43■□□□□ 0.54
Cntnap3E9PY62 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC18.43■□□□□ 0.54
Cntnap3E9PY62 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC18.43■□□□□ 0.54
Cntnap3E9PY62 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cntnap3E9PY62 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cntnap3E9PY62 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Cntnap3E9PY62 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cntnap3E9PY62 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cntnap3E9PY62 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cntnap3E9PY62 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Cntnap3E9PY62 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Cntnap3E9PY62 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Cntnap3E9PY62 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cntnap3E9PY62 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cntnap3E9PY62 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cntnap3E9PY62 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cntnap3E9PY62 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC18.42■□□□□ 0.54
Cntnap3E9PY62 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cntnap3E9PY62 Gm11025-201ENSMUST00000140773 466 ntBASIC18.42■□□□□ 0.54
Cntnap3E9PY62 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
Cntnap3E9PY62 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC18.42■□□□□ 0.54
Cntnap3E9PY62 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cntnap3E9PY62 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cntnap3E9PY62 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cntnap3E9PY62 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cntnap3E9PY62 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cntnap3E9PY62 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC18.42■□□□□ 0.54
Cntnap3E9PY62 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cntnap3E9PY62 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC18.42■□□□□ 0.54
Cntnap3E9PY62 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cntnap3E9PY62 Phf7-203ENSMUST00000226565 1971 ntBASIC18.41■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms