Protein–RNA interactions for Protein: D3YXG0

Hmcn1, Hemicentin-1, mousemouse

Predictions only

Length 5,634 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmcn1D3YXG0 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Hmcn1D3YXG0 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC4.85□□□□□ -1.63
Hmcn1D3YXG0 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC4.85□□□□□ -1.63
Hmcn1D3YXG0 Gm12151-201ENSMUST00000121374 290 ntBASIC4.85□□□□□ -1.63
Hmcn1D3YXG0 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Hmcn1D3YXG0 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Hmcn1D3YXG0 Gm7506-201ENSMUST00000207758 815 ntBASIC4.85□□□□□ -1.63
Hmcn1D3YXG0 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Hmcn1D3YXG0 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Hmcn1D3YXG0 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Hmcn1D3YXG0 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Hmcn1D3YXG0 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Hmcn1D3YXG0 Gm42922-201ENSMUST00000195887 2078 ntBASIC4.85□□□□□ -1.63
Hmcn1D3YXG0 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Hmcn1D3YXG0 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Hmcn1D3YXG0 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC4.84□□□□□ -1.63
Hmcn1D3YXG0 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Hmcn1D3YXG0 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC4.84□□□□□ -1.63
Hmcn1D3YXG0 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Hmcn1D3YXG0 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Hmcn1D3YXG0 Mir7085-201ENSMUST00000184353 66 ntBASIC4.84□□□□□ -1.63
Hmcn1D3YXG0 Gm17968-201ENSMUST00000194902 784 ntBASIC4.84□□□□□ -1.63
Hmcn1D3YXG0 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC4.84□□□□□ -1.63
Hmcn1D3YXG0 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC4.84□□□□□ -1.63
Hmcn1D3YXG0 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
Hmcn1D3YXG0 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Hmcn1D3YXG0 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
Hmcn1D3YXG0 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Hmcn1D3YXG0 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
Hmcn1D3YXG0 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
Hmcn1D3YXG0 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC4.84□□□□□ -1.63
Hmcn1D3YXG0 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
Hmcn1D3YXG0 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC4.84□□□□□ -1.63
Hmcn1D3YXG0 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Hmcn1D3YXG0 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Hmcn1D3YXG0 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
Hmcn1D3YXG0 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
Hmcn1D3YXG0 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC4.84□□□□□ -1.63
Hmcn1D3YXG0 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC4.84□□□□□ -1.63
Hmcn1D3YXG0 Gm18421-201ENSMUST00000204122 625 ntBASIC4.84□□□□□ -1.63
Hmcn1D3YXG0 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC4.84□□□□□ -1.63
Hmcn1D3YXG0 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Hmcn1D3YXG0 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC4.84□□□□□ -1.63
Hmcn1D3YXG0 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
Hmcn1D3YXG0 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
Hmcn1D3YXG0 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
Hmcn1D3YXG0 Wnt10b-204ENSMUST00000226655 1807 ntBASIC4.84□□□□□ -1.63
Hmcn1D3YXG0 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Hmcn1D3YXG0 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
Hmcn1D3YXG0 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Hmcn1D3YXG0 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
Hmcn1D3YXG0 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC4.84□□□□□ -1.63
Hmcn1D3YXG0 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
Hmcn1D3YXG0 AC159621.2-201ENSMUST00000223519 1326 ntBASIC4.84□□□□□ -1.63
Hmcn1D3YXG0 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Hmcn1D3YXG0 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Hmcn1D3YXG0 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
Hmcn1D3YXG0 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC4.84□□□□□ -1.63
Hmcn1D3YXG0 Gm15487-201ENSMUST00000122373 465 ntBASIC4.84□□□□□ -1.63
Hmcn1D3YXG0 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Hmcn1D3YXG0 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
Hmcn1D3YXG0 AL593843.1-201ENSMUST00000195891 145 ntBASIC4.84□□□□□ -1.63
Hmcn1D3YXG0 AC149294.4-201ENSMUST00000227870 882 ntBASIC4.84□□□□□ -1.63
Hmcn1D3YXG0 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Hmcn1D3YXG0 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Hmcn1D3YXG0 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
Hmcn1D3YXG0 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
Hmcn1D3YXG0 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
Hmcn1D3YXG0 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
Hmcn1D3YXG0 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
Hmcn1D3YXG0 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
Hmcn1D3YXG0 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Hmcn1D3YXG0 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC4.84□□□□□ -1.63
Hmcn1D3YXG0 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Hmcn1D3YXG0 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
Hmcn1D3YXG0 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.64
Hmcn1D3YXG0 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC4.84□□□□□ -1.64
Hmcn1D3YXG0 Gm18827-201ENSMUST00000188341 790 ntBASIC4.84□□□□□ -1.64
Hmcn1D3YXG0 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
Hmcn1D3YXG0 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC4.84□□□□□ -1.64
Hmcn1D3YXG0 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC4.84□□□□□ -1.64
Hmcn1D3YXG0 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.64
Hmcn1D3YXG0 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.64
Hmcn1D3YXG0 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
Hmcn1D3YXG0 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.64
Hmcn1D3YXG0 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
Hmcn1D3YXG0 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
Hmcn1D3YXG0 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Hmcn1D3YXG0 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC4.83□□□□□ -1.64
Hmcn1D3YXG0 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Hmcn1D3YXG0 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Hmcn1D3YXG0 Gm9794-201ENSMUST00000202370 423 ntBASIC4.83□□□□□ -1.64
Hmcn1D3YXG0 Gm37419-201ENSMUST00000210705 114 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
Hmcn1D3YXG0 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
Hmcn1D3YXG0 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC4.83□□□□□ -1.64
Hmcn1D3YXG0 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC4.83□□□□□ -1.64
Hmcn1D3YXG0 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
Hmcn1D3YXG0 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Hmcn1D3YXG0 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Hmcn1D3YXG0 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC4.83□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms