Protein–RNA interactions for Protein: C0HKE1

Hist1h2ab, Histone H2A type 1-B, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h2abC0HKE1 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Hist1h2abC0HKE1 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC15.43■□□□□ 0.06
Hist1h2abC0HKE1 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Hist1h2abC0HKE1 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC15.42■□□□□ 0.06
Hist1h2abC0HKE1 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Hist1h2abC0HKE1 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Hist1h2abC0HKE1 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Hist1h2abC0HKE1 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Hist1h2abC0HKE1 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Hist1h2abC0HKE1 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Hist1h2abC0HKE1 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Hist1h2abC0HKE1 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Hist1h2abC0HKE1 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Hist1h2abC0HKE1 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Hist1h2abC0HKE1 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Hist1h2abC0HKE1 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Hist1h2abC0HKE1 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Hist1h2abC0HKE1 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Hist1h2abC0HKE1 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Hist1h2abC0HKE1 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC15.41■□□□□ 0.06
Hist1h2abC0HKE1 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC15.41■□□□□ 0.06
Hist1h2abC0HKE1 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Hist1h2abC0HKE1 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Hist1h2abC0HKE1 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Hist1h2abC0HKE1 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC15.41■□□□□ 0.06
Hist1h2abC0HKE1 Gm10653-202ENSMUST00000139570 835 ntBASIC15.41■□□□□ 0.06
Hist1h2abC0HKE1 Gm37025-201ENSMUST00000195159 829 ntBASIC15.41■□□□□ 0.06
Hist1h2abC0HKE1 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC15.41■□□□□ 0.06
Hist1h2abC0HKE1 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Hist1h2abC0HKE1 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC15.41■□□□□ 0.06
Hist1h2abC0HKE1 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Hist1h2abC0HKE1 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Hist1h2abC0HKE1 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Hist1h2abC0HKE1 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Hist1h2abC0HKE1 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Hist1h2abC0HKE1 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Hist1h2abC0HKE1 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Hist1h2abC0HKE1 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Hist1h2abC0HKE1 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Hist1h2abC0HKE1 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Hist1h2abC0HKE1 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Hist1h2abC0HKE1 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Hist1h2abC0HKE1 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC15.4■□□□□ 0.06
Hist1h2abC0HKE1 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Hist1h2abC0HKE1 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Hist1h2abC0HKE1 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Hist1h2abC0HKE1 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Hist1h2abC0HKE1 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Hist1h2abC0HKE1 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Hist1h2abC0HKE1 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Hist1h2abC0HKE1 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC15.4■□□□□ 0.06
Hist1h2abC0HKE1 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC15.4■□□□□ 0.06
Hist1h2abC0HKE1 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Hist1h2abC0HKE1 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Hist1h2abC0HKE1 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Hist1h2abC0HKE1 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Hist1h2abC0HKE1 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Hist1h2abC0HKE1 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Hist1h2abC0HKE1 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Hist1h2abC0HKE1 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Hist1h2abC0HKE1 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Hist1h2abC0HKE1 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Hist1h2abC0HKE1 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Hist1h2abC0HKE1 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
Hist1h2abC0HKE1 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Hist1h2abC0HKE1 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Hist1h2abC0HKE1 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Hist1h2abC0HKE1 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Hist1h2abC0HKE1 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Hist1h2abC0HKE1 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Hist1h2abC0HKE1 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Hist1h2abC0HKE1 Gm13168-201ENSMUST00000121771 632 ntBASIC15.39■□□□□ 0.05
Hist1h2abC0HKE1 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC15.39■□□□□ 0.05
Hist1h2abC0HKE1 Gm12669-201ENSMUST00000122162 1009 ntBASIC15.39■□□□□ 0.05
Hist1h2abC0HKE1 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Hist1h2abC0HKE1 Gm10698-201ENSMUST00000182663 604 ntBASIC15.39■□□□□ 0.05
Hist1h2abC0HKE1 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Hist1h2abC0HKE1 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Hist1h2abC0HKE1 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Hist1h2abC0HKE1 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Hist1h2abC0HKE1 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Hist1h2abC0HKE1 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Hist1h2abC0HKE1 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Hist1h2abC0HKE1 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Hist1h2abC0HKE1 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Hist1h2abC0HKE1 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Hist1h2abC0HKE1 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC15.38■□□□□ 0.05
Hist1h2abC0HKE1 Gm44443-201ENSMUST00000204396 5633 ntBASIC15.38■□□□□ 0.05
Hist1h2abC0HKE1 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Hist1h2abC0HKE1 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Hist1h2abC0HKE1 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC15.38■□□□□ 0.05
Hist1h2abC0HKE1 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Hist1h2abC0HKE1 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Hist1h2abC0HKE1 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Hist1h2abC0HKE1 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
Hist1h2abC0HKE1 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Hist1h2abC0HKE1 Gm28265-201ENSMUST00000188201 2319 ntBASIC15.38■□□□□ 0.05
Hist1h2abC0HKE1 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Hist1h2abC0HKE1 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Hist1h2abC0HKE1 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 15.9 ms