Protein–RNA interactions for Protein: B5KM66

Syce3, Synaptonemal complex central element protein 3, mousemouse

Predictions only

Length 88 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syce3B5KM66 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC19.31■□□□□ 0.68
Syce3B5KM66 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
Syce3B5KM66 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC19.3■□□□□ 0.68
Syce3B5KM66 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Syce3B5KM66 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Syce3B5KM66 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Syce3B5KM66 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Syce3B5KM66 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Syce3B5KM66 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Syce3B5KM66 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC19.3■□□□□ 0.68
Syce3B5KM66 Gm11643-201ENSMUST00000119578 864 ntBASIC19.3■□□□□ 0.68
Syce3B5KM66 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Syce3B5KM66 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
Syce3B5KM66 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Syce3B5KM66 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Syce3B5KM66 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Syce3B5KM66 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Syce3B5KM66 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Syce3B5KM66 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Syce3B5KM66 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Syce3B5KM66 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Syce3B5KM66 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC19.3■□□□□ 0.68
Syce3B5KM66 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Syce3B5KM66 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Syce3B5KM66 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Syce3B5KM66 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Syce3B5KM66 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Syce3B5KM66 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Syce3B5KM66 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Syce3B5KM66 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Syce3B5KM66 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC19.29■□□□□ 0.68
Syce3B5KM66 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Syce3B5KM66 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC19.29■□□□□ 0.68
Syce3B5KM66 Gm6211-202ENSMUST00000167849 925 ntBASIC19.29■□□□□ 0.68
Syce3B5KM66 Gm18671-201ENSMUST00000214826 683 ntBASIC19.29■□□□□ 0.68
Syce3B5KM66 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Syce3B5KM66 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Syce3B5KM66 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC19.29■□□□□ 0.68
Syce3B5KM66 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Syce3B5KM66 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Syce3B5KM66 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Syce3B5KM66 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Syce3B5KM66 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Syce3B5KM66 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Syce3B5KM66 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Syce3B5KM66 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Syce3B5KM66 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Syce3B5KM66 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Syce3B5KM66 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Syce3B5KM66 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC19.28■□□□□ 0.68
Syce3B5KM66 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Syce3B5KM66 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC19.28■□□□□ 0.68
Syce3B5KM66 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Syce3B5KM66 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Syce3B5KM66 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC19.28■□□□□ 0.68
Syce3B5KM66 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Syce3B5KM66 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Syce3B5KM66 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Syce3B5KM66 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Syce3B5KM66 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Syce3B5KM66 AL590614.2-201ENSMUST00000225374 1937 ntBASIC19.27■□□□□ 0.68
Syce3B5KM66 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Syce3B5KM66 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC19.27■□□□□ 0.68
Syce3B5KM66 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Syce3B5KM66 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Syce3B5KM66 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Syce3B5KM66 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Syce3B5KM66 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Syce3B5KM66 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC19.27■□□□□ 0.68
Syce3B5KM66 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC19.27■□□□□ 0.68
Syce3B5KM66 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Syce3B5KM66 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Syce3B5KM66 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC19.27■□□□□ 0.68
Syce3B5KM66 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Syce3B5KM66 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC19.27■□□□□ 0.67
Syce3B5KM66 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Syce3B5KM66 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Syce3B5KM66 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Syce3B5KM66 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Syce3B5KM66 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC19.27■□□□□ 0.67
Syce3B5KM66 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Syce3B5KM66 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Syce3B5KM66 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Syce3B5KM66 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Syce3B5KM66 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Syce3B5KM66 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Syce3B5KM66 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Syce3B5KM66 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Syce3B5KM66 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Syce3B5KM66 Gm6576-201ENSMUST00000169678 883 ntBASIC19.26■□□□□ 0.67
Syce3B5KM66 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC19.26■□□□□ 0.67
Syce3B5KM66 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Syce3B5KM66 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Syce3B5KM66 Gm9867-201ENSMUST00000192212 2647 ntBASIC19.26■□□□□ 0.67
Syce3B5KM66 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Syce3B5KM66 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Syce3B5KM66 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Syce3B5KM66 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Syce3B5KM66 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Syce3B5KM66 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms