Protein–RNA interactions for Protein: B2RQC2

Usp42, Ubiquitin carboxyl-terminal hydrolase 42, mousemouse

Known RBP Predictions only

Length 1,324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp42B2RQC2 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Usp42B2RQC2 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Usp42B2RQC2 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Usp42B2RQC2 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Usp42B2RQC2 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Usp42B2RQC2 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Usp42B2RQC2 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
Usp42B2RQC2 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Usp42B2RQC2 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Usp42B2RQC2 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Usp42B2RQC2 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Usp42B2RQC2 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Usp42B2RQC2 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Usp42B2RQC2 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Usp42B2RQC2 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Usp42B2RQC2 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
Usp42B2RQC2 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
Usp42B2RQC2 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Usp42B2RQC2 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC19.66■□□□□ 0.74
Usp42B2RQC2 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC19.66■□□□□ 0.74
Usp42B2RQC2 Gm27389-201ENSMUST00000183622 195 ntBASIC19.66■□□□□ 0.74
Usp42B2RQC2 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Usp42B2RQC2 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Usp42B2RQC2 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Usp42B2RQC2 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Usp42B2RQC2 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Usp42B2RQC2 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Usp42B2RQC2 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Usp42B2RQC2 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Usp42B2RQC2 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Usp42B2RQC2 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Usp42B2RQC2 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Usp42B2RQC2 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Usp42B2RQC2 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Usp42B2RQC2 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Usp42B2RQC2 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Usp42B2RQC2 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Usp42B2RQC2 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Usp42B2RQC2 Gm10013-201ENSMUST00000106074 672 ntBASIC19.65■□□□□ 0.74
Usp42B2RQC2 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Usp42B2RQC2 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Usp42B2RQC2 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
Usp42B2RQC2 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Usp42B2RQC2 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Usp42B2RQC2 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Usp42B2RQC2 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Usp42B2RQC2 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Usp42B2RQC2 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Usp42B2RQC2 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Usp42B2RQC2 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC19.64■□□□□ 0.74
Usp42B2RQC2 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Usp42B2RQC2 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Usp42B2RQC2 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Usp42B2RQC2 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Usp42B2RQC2 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC19.64■□□□□ 0.73
Usp42B2RQC2 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC19.64■□□□□ 0.73
Usp42B2RQC2 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC19.64■□□□□ 0.73
Usp42B2RQC2 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Usp42B2RQC2 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Usp42B2RQC2 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Usp42B2RQC2 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Usp42B2RQC2 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Usp42B2RQC2 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Usp42B2RQC2 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Usp42B2RQC2 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC19.64■□□□□ 0.73
Usp42B2RQC2 Gm11336-201ENSMUST00000118168 334 ntBASIC19.63■□□□□ 0.73
Usp42B2RQC2 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Usp42B2RQC2 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Usp42B2RQC2 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC19.63■□□□□ 0.73
Usp42B2RQC2 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC19.63■□□□□ 0.73
Usp42B2RQC2 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Usp42B2RQC2 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Usp42B2RQC2 Gm45774-201ENSMUST00000211992 2665 ntBASIC19.63■□□□□ 0.73
Usp42B2RQC2 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Usp42B2RQC2 AC158538.1-201ENSMUST00000225870 294 ntBASIC19.63■□□□□ 0.73
Usp42B2RQC2 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Usp42B2RQC2 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Usp42B2RQC2 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Usp42B2RQC2 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Usp42B2RQC2 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Usp42B2RQC2 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC19.63■□□□□ 0.73
Usp42B2RQC2 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Usp42B2RQC2 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Usp42B2RQC2 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Usp42B2RQC2 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Usp42B2RQC2 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Usp42B2RQC2 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Usp42B2RQC2 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Usp42B2RQC2 Zfp264-201ENSMUST00000208656 1563 ntBASIC19.62■□□□□ 0.73
Usp42B2RQC2 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Usp42B2RQC2 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Usp42B2RQC2 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Usp42B2RQC2 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Usp42B2RQC2 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Usp42B2RQC2 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Usp42B2RQC2 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Usp42B2RQC2 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Usp42B2RQC2 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Usp42B2RQC2 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Usp42B2RQC2 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC19.62■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms